Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.29■□□□□ 0.2
CDCA3Q99618 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDCA3Q99618 MIR769-201ENST00000390225 118 ntBASIC16.29■□□□□ 0.2
CDCA3Q99618 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDCA3Q99618 AL645937.2-201ENST00000396808 931 ntBASIC16.29■□□□□ 0.2
CDCA3Q99618 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.29■□□□□ 0.2
CDCA3Q99618 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.29■□□□□ 0.2
CDCA3Q99618 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
CDCA3Q99618 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.29■□□□□ 0.2
CDCA3Q99618 AL451050.2-201ENST00000606967 682 ntBASIC16.29■□□□□ 0.2
CDCA3Q99618 ENPP7P14-201ENST00000621765 1040 ntBASIC16.29■□□□□ 0.2
CDCA3Q99618 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDCA3Q99618 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDCA3Q99618 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDCA3Q99618 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDCA3Q99618 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CDCA3Q99618 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDCA3Q99618 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
CDCA3Q99618 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDCA3Q99618 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CDCA3Q99618 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDCA3Q99618 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDCA3Q99618 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDCA3Q99618 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDCA3Q99618 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDCA3Q99618 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDCA3Q99618 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDCA3Q99618 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDCA3Q99618 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.28■□□□□ 0.2
CDCA3Q99618 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.28■□□□□ 0.2
CDCA3Q99618 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDCA3Q99618 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CDCA3Q99618 HINT2P1-201ENST00000419438 481 ntBASIC16.28■□□□□ 0.2
CDCA3Q99618 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.28■□□□□ 0.2
CDCA3Q99618 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.28■□□□□ 0.2
CDCA3Q99618 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CDCA3Q99618 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.28■□□□□ 0.2
CDCA3Q99618 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.28■□□□□ 0.2
CDCA3Q99618 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.28■□□□□ 0.2
CDCA3Q99618 AC007663.3-201ENST00000609632 465 ntBASIC16.28■□□□□ 0.2
CDCA3Q99618 AC091812.3-201ENST00000621362 345 ntBASIC16.28■□□□□ 0.2
CDCA3Q99618 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
CDCA3Q99618 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
CDCA3Q99618 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.28■□□□□ 0.2
CDCA3Q99618 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDCA3Q99618 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDCA3Q99618 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDCA3Q99618 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.28■□□□□ 0.2
CDCA3Q99618 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDCA3Q99618 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDCA3Q99618 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.27■□□□□ 0.2
CDCA3Q99618 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.27■□□□□ 0.2
CDCA3Q99618 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDCA3Q99618 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDCA3Q99618 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDCA3Q99618 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDCA3Q99618 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDCA3Q99618 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CDCA3Q99618 AL645608.8-201ENST00000606034 2086 ntBASIC16.27■□□□□ 0.2
CDCA3Q99618 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDCA3Q99618 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.27■□□□□ 0.2
CDCA3Q99618 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDCA3Q99618 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDCA3Q99618 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CDCA3Q99618 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDCA3Q99618 FXNP2-201ENST00000411625 547 ntBASIC16.27■□□□□ 0.2
CDCA3Q99618 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDCA3Q99618 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.27■□□□□ 0.2
CDCA3Q99618 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.27■□□□□ 0.2
CDCA3Q99618 MAGEA5-201ENST00000446757 942 ntBASIC16.27■□□□□ 0.2
CDCA3Q99618 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.27■□□□□ 0.2
CDCA3Q99618 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.27■□□□□ 0.2
CDCA3Q99618 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.27■□□□□ 0.2
CDCA3Q99618 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.27■□□□□ 0.2
CDCA3Q99618 CU633904.3-201ENST00000624042 1029 ntBASIC16.27■□□□□ 0.2
CDCA3Q99618 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.27■□□□□ 0.2
CDCA3Q99618 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDCA3Q99618 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDCA3Q99618 LRRC59-203ENST00000576448 1531 ntBASIC16.27■□□□□ 0.2
CDCA3Q99618 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.27■□□□□ 0.2
CDCA3Q99618 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CDCA3Q99618 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDCA3Q99618 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms