Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 AC015911.4-201ENST00000588022 1070 ntBASIC18.77■□□□□ 0.6
NEK1Q96PY6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NEK1Q96PY6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
NEK1Q96PY6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 AC051619.7-201ENST00000568314 623 ntBASIC18.76■□□□□ 0.59
NEK1Q96PY6 MIR3197-201ENST00000582241 73 ntBASIC18.76■□□□□ 0.59
NEK1Q96PY6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 SPDYE12P-201ENST00000618416 771 ntBASIC18.76■□□□□ 0.59
NEK1Q96PY6 AC093028.1-201ENST00000622998 982 ntBASIC18.76■□□□□ 0.59
NEK1Q96PY6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK1Q96PY6 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.76■□□□□ 0.59
NEK1Q96PY6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.75■□□□□ 0.59
NEK1Q96PY6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK1Q96PY6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK1Q96PY6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK1Q96PY6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK1Q96PY6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK1Q96PY6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 TARDBPP1-201ENST00000442013 1203 ntBASIC18.75■□□□□ 0.59
NEK1Q96PY6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK1Q96PY6 KLF2P3-201ENST00000451977 1087 ntBASIC18.75■□□□□ 0.59
NEK1Q96PY6 HLA-V-204ENST00000476601 1289 ntBASIC18.75■□□□□ 0.59
NEK1Q96PY6 AC125807.1-201ENST00000483097 614 ntBASIC18.75■□□□□ 0.59
NEK1Q96PY6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NEK1Q96PY6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NEK1Q96PY6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms