Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 SOCS2P1-201ENST00000417727 557 ntBASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 AC134915.1-201ENST00000426461 574 ntBASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SYNGAP1Q96PV0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 CYP2T1P-202ENST00000641596 2535 ntBASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 AC136604.1-201ENST00000418535 575 ntBASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 PTP4A1P2-201ENST00000546033 454 ntBASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 AC093525.8-201ENST00000624099 1342 ntBASIC17.95■□□□□ 0.46
SYNGAP1Q96PV0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 AC006449.6-201ENST00000612330 2296 ntBASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 KRT18P64-201ENST00000434946 1219 ntBASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 AC068587.3-201ENST00000526613 355 ntBASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 AL583810.1-201ENST00000553344 1045 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms