Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 AL031731.1-201ENST00000642131 2094 ntBASIC12.09□□□□□ -0.47
AP1S3Q96PC3 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 AP003680.1-201ENST00000598970 3660 ntBASIC12.09□□□□□ -0.47
AP1S3Q96PC3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 PCGF3-213ENST00000620529 1899 ntBASIC12.09□□□□□ -0.47
AP1S3Q96PC3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 KRT17P6-201ENST00000453795 1220 ntBASIC12.09□□□□□ -0.47
AP1S3Q96PC3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 NSUN5P1-202ENST00000421140 1535 ntBASIC12.09□□□□□ -0.47
AP1S3Q96PC3 NSUN5P2-203ENST00000457352 1529 ntBASIC12.09□□□□□ -0.47
AP1S3Q96PC3 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 AC005252.3-201ENST00000623855 2258 ntBASIC12.09□□□□□ -0.47
AP1S3Q96PC3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 NCF1C-201ENST00000438382 1427 ntBASIC12.09□□□□□ -0.47
AP1S3Q96PC3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.09□□□□□ -0.47
AP1S3Q96PC3 LINC01144-201ENST00000626198 1710 ntBASIC12.08□□□□□ -0.47
AP1S3Q96PC3 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.08□□□□□ -0.47
AP1S3Q96PC3 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 AC079776.2-201ENST00000641154 1609 ntBASIC12.08□□□□□ -0.48
AP1S3Q96PC3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 AC107918.4-201ENST00000641966 3141 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms