Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUSD3Q96L08 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUSD3Q96L08 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUSD3Q96L08 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 AC018665.1-201ENST00000622927 1362 ntBASIC16.67■□□□□ 0.26
SUSD3Q96L08 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUSD3Q96L08 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUSD3Q96L08 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUSD3Q96L08 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUSD3Q96L08 MIR1909-201ENST00000411312 80 ntBASIC16.67■□□□□ 0.26
SUSD3Q96L08 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUSD3Q96L08 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 GAPDHP40-201ENST00000505218 1006 ntBASIC16.67■□□□□ 0.26
SUSD3Q96L08 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 AC093813.1-201ENST00000605066 256 ntBASIC16.67■□□□□ 0.26
SUSD3Q96L08 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SUSD3Q96L08 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.67■□□□□ 0.26
SUSD3Q96L08 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUSD3Q96L08 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUSD3Q96L08 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUSD3Q96L08 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 PCDHB19P-201ENST00000570871 2371 ntBASIC16.66■□□□□ 0.26
SUSD3Q96L08 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 KRT43P-201ENST00000434019 910 ntBASIC16.66■□□□□ 0.26
SUSD3Q96L08 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 AC234783.1-201ENST00000441761 496 ntBASIC16.66■□□□□ 0.26
SUSD3Q96L08 CROCCP4-201ENST00000457096 498 ntBASIC16.66■□□□□ 0.26
SUSD3Q96L08 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 PTP4A1P2-201ENST00000546033 454 ntBASIC16.66■□□□□ 0.26
SUSD3Q96L08 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 AC009486.1-201ENST00000569860 813 ntBASIC16.66■□□□□ 0.26
SUSD3Q96L08 AC107373.2-201ENST00000607735 490 ntBASIC16.66■□□□□ 0.26
SUSD3Q96L08 AC005252.2-201ENST00000624630 1141 ntBASIC16.66■□□□□ 0.26
SUSD3Q96L08 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.66■□□□□ 0.26
SUSD3Q96L08 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.66■□□□□ 0.26
SUSD3Q96L08 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUSD3Q96L08 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SUSD3Q96L08 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SUSD3Q96L08 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.65■□□□□ 0.26
SUSD3Q96L08 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SUSD3Q96L08 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SUSD3Q96L08 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.65■□□□□ 0.26
SUSD3Q96L08 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SUSD3Q96L08 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms