Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 AC096734.2-201ENST00000562054 433 ntBASIC15.33■□□□□ 0.04
VPS33AQ96AX1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 AL031008.1-201ENST00000619963 541 ntBASIC15.32■□□□□ 0.04
VPS33AQ96AX1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS33AQ96AX1 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms