Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 AC233702.3-201ENST00000578656 1387 ntBASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 AC129492.6-201ENST00000611383 1305 ntBASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 POM121L3P-201ENST00000419331 1163 ntBASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 AC021097.1-201ENST00000607902 574 ntBASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 AC091076.1-201ENST00000610741 619 ntBASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 AL022326.1-202ENST00000641533 845 ntBASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 REXO1L2P-201ENST00000425429 2069 ntBASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MBD3L1Q8WWY6 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 WASH3P-207ENST00000560956 1394 ntBASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 FO538757.1-201ENST00000623083 1397 ntBASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 LINC01230-201ENST00000625222 3017 ntBASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 PTCHD3P3-201ENST00000403073 906 ntBASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 MIR4313-201ENST00000580760 101 ntBASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 NTF6B-201ENST00000591913 560 ntBASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 Z69720.1-201ENST00000601483 472 ntBASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MBD3L1Q8WWY6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms