Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 AL022342.1-201ENST00000400363 863 ntBASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 AC140658.5-201ENST00000438532 169 ntBASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 AC109635.5-201ENST00000533593 962 ntBASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 PDPK2P-202ENST00000562415 1191 ntBASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 AL009183.1-201ENST00000603760 355 ntBASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.44□□□□□ -0.26
RTN4IP1Q8WWV3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 AC068137.2-201ENST00000605408 478 ntBASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms