Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 CETN4P-206ENST00000642099 2168 ntBASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 BCRP1-201ENST00000444246 691 ntBASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 INGX-202ENST00000489074 768 ntBASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 AL096865.1-201ENST00000606796 927 ntBASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 AL138828.2-201ENST00000615812 383 ntBASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCC2Q8TAQ2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 AC103702.1-201ENST00000548801 2630 ntBASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 AL512638.1-201ENST00000457493 794 ntBASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 PHKG1P2-201ENST00000457537 863 ntBASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 HLA-V-204ENST00000476601 1289 ntBASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 HNRNPUP1-201ENST00000554987 333 ntBASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 AL450472.2-201ENST00000603663 1156 ntBASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 AC087481.3-201ENST00000602886 1894 ntBASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.56■□□□□ 0.56
SMARCC2Q8TAQ2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms