Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 AC148477.4-201ENST00000613430 1793 ntBASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 HSPB1P2-201ENST00000448722 546 ntBASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 AC105129.2-201ENST00000559536 390 ntBASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 AC015967.2-201ENST00000624092 234 ntBASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 AC006435.4-201ENST00000625037 234 ntBASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 AL356737.1-201ENST00000634391 234 ntBASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHDC9Q8NEP7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 FLJ38576-201ENST00000623820 2459 ntBASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 TPM3P8-201ENST00000330554 643 ntBASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 AL662890.1-201ENST00000396818 632 ntBASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 NUS1P3-201ENST00000423502 862 ntBASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 MIR3619-201ENST00000579667 83 ntBASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 AC016629.1-201ENST00000596579 586 ntBASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHDC9Q8NEP7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms