Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMG8Q8ND04 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.98■□□□□ 0.31
SMG8Q8ND04 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMG8Q8ND04 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMG8Q8ND04 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SMG8Q8ND04 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMG8Q8ND04 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMG8Q8ND04 AC024909.3-201ENST00000611513 2257 ntBASIC16.98■□□□□ 0.31
SMG8Q8ND04 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMG8Q8ND04 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 AC005252.2-201ENST00000624630 1141 ntBASIC16.97■□□□□ 0.31
SMG8Q8ND04 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SMG8Q8ND04 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMG8Q8ND04 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMG8Q8ND04 MSTO2P-201ENST00000314835 1709 ntBASIC16.96■□□□□ 0.31
SMG8Q8ND04 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMG8Q8ND04 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMG8Q8ND04 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMG8Q8ND04 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMG8Q8ND04 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMG8Q8ND04 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMG8Q8ND04 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMG8Q8ND04 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMG8Q8ND04 AC234783.1-201ENST00000441761 496 ntBASIC16.96■□□□□ 0.31
SMG8Q8ND04 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMG8Q8ND04 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMG8Q8ND04 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMG8Q8ND04 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 PCDHB19P-201ENST00000570871 2371 ntBASIC16.96■□□□□ 0.31
SMG8Q8ND04 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMG8Q8ND04 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.96■□□□□ 0.31
SMG8Q8ND04 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMG8Q8ND04 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SMG8Q8ND04 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.96■□□□□ 0.3
SMG8Q8ND04 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMG8Q8ND04 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SMG8Q8ND04 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMG8Q8ND04 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SMG8Q8ND04 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.95■□□□□ 0.3
SMG8Q8ND04 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.95■□□□□ 0.3
SMG8Q8ND04 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SMG8Q8ND04 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
SMG8Q8ND04 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.95■□□□□ 0.3
SMG8Q8ND04 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMG8Q8ND04 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMG8Q8ND04 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMG8Q8ND04 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMG8Q8ND04 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMG8Q8ND04 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms