Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCSK9Q8NBP7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCSK9Q8NBP7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCSK9Q8NBP7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCSK9Q8NBP7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCSK9Q8NBP7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCSK9Q8NBP7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.33■□□□□ 0.37
PCSK9Q8NBP7 ALOX12P2-203ENST00000570921 1945 ntBASIC17.33■□□□□ 0.37
PCSK9Q8NBP7 AC011477.6-201ENST00000604980 1927 ntBASIC17.33■□□□□ 0.37
PCSK9Q8NBP7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCSK9Q8NBP7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCSK9Q8NBP7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 SCARNA20.5-201ENST00000516991 142 ntBASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 AP006547.1-201ENST00000563435 692 ntBASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 AC104982.3-201ENST00000581995 514 ntBASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCSK9Q8NBP7 AC018892.3-201ENST00000623986 2499 ntBASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 ACTBP8-201ENST00000403258 1108 ntBASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 AC114812.1-204ENST00000449669 728 ntBASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCSK9Q8NBP7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 AC006449.6-201ENST00000612330 2296 ntBASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.31■□□□□ 0.36
PCSK9Q8NBP7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms