Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 RPL37AP1-201ENST00000412502 279 ntBASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 AC008738.7-201ENST00000609744 511 ntBASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 TEX28P1-201ENST00000613479 1221 ntBASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 TEX28P2-201ENST00000617764 1221 ntBASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 AL035456.1-201ENST00000456064 1369 ntBASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC33Q8N5R6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC33Q8N5R6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CCDC33Q8N5R6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC33Q8N5R6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
CCDC33Q8N5R6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 AC112504.1-201ENST00000623415 1841 ntBASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 FAM220BP-201ENST00000377689 816 ntBASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 SPTLC1P1-201ENST00000447199 261 ntBASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 AC098859.1-201ENST00000502915 1238 ntBASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 AC009407.1-201ENST00000568958 598 ntBASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 AC069224.1-201ENST00000566372 1715 ntBASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC33Q8N5R6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms