Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 HNRNPUP1-201ENST00000554987 333 ntBASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 PCDHB19P-201ENST00000570871 2371 ntBASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 AC138969.3-201ENST00000546612 1459 ntBASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 AC138932.2-201ENST00000548268 1459 ntBASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 AC126755.4-201ENST00000549796 1459 ntBASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 AC099398.1-201ENST00000567919 2776 ntBASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 AL118508.1-201ENST00000613502 2345 ntBASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 RPL13P2-201ENST00000440687 659 ntBASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 GAPDHP21-201ENST00000450301 1010 ntBASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 AC018695.7-201ENST00000624587 2492 ntBASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.72■□□□□ 0.27
SCN4BQ8IWT1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 NME2P1-201ENST00000426182 414 ntBASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 KRT18P64-201ENST00000434946 1219 ntBASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 RARRES2P5-201ENST00000564013 466 ntBASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 AL607033.1-201ENST00000623900 1599 ntBASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.71■□□□□ 0.27
SCN4BQ8IWT1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.71■□□□□ 0.26
SCN4BQ8IWT1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SCN4BQ8IWT1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 CLK3P2-201ENST00000427566 1453 ntBASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 AP006294.1-201ENST00000415407 339 ntBASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 COX5BP8-201ENST00000416911 349 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms