Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CDKL3Q8IVW4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.33■□□□□ 0.21
CDKL3Q8IVW4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDKL3Q8IVW4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CDKL3Q8IVW4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDKL3Q8IVW4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
CDKL3Q8IVW4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.33■□□□□ 0.21
CDKL3Q8IVW4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDKL3Q8IVW4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDKL3Q8IVW4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.33■□□□□ 0.21
CDKL3Q8IVW4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDKL3Q8IVW4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 AC004461.1-201ENST00000412461 403 ntBASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 AP000347.1-202ENST00000435868 847 ntBASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 MIR3687-2-201ENST00000577708 61 ntBASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 MIR3687-1-201ENST00000614492 61 ntBASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL3Q8IVW4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 FAM58DP-201ENST00000428076 619 ntBASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 AP000344.2-201ENST00000512987 629 ntBASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 AC144831.1-201ENST00000573312 2656 ntBASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 AC018529.1-201ENST00000613063 361 ntBASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL3Q8IVW4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 AC023157.3-201ENST00000619086 2088 ntBASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms