Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.29■□□□□ 0.36
CNGA4Q8IV77 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 AC126755.1-201ENST00000525846 6405 ntBASIC17.29■□□□□ 0.36
CNGA4Q8IV77 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 AC098859.1-201ENST00000502915 1238 ntBASIC17.29■□□□□ 0.36
CNGA4Q8IV77 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 AC061975.2-201ENST00000581722 295 ntBASIC17.29■□□□□ 0.36
CNGA4Q8IV77 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 AC148477.4-201ENST00000613430 1793 ntBASIC17.29■□□□□ 0.36
CNGA4Q8IV77 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.29■□□□□ 0.36
CNGA4Q8IV77 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CNGA4Q8IV77 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 MIR7706-201ENST00000613747 67 ntBASIC17.28■□□□□ 0.36
CNGA4Q8IV77 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 AL390755.1-201ENST00000623716 2027 ntBASIC17.28■□□□□ 0.36
CNGA4Q8IV77 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.28■□□□□ 0.36
CNGA4Q8IV77 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA4Q8IV77 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CNGA4Q8IV77 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA4Q8IV77 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA4Q8IV77 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA4Q8IV77 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA4Q8IV77 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA4Q8IV77 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA4Q8IV77 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA4Q8IV77 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.27■□□□□ 0.36
CNGA4Q8IV77 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA4Q8IV77 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms