Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
LRRTM1Q86UE6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
LRRTM1Q86UE6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LRRTM1Q86UE6 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LRRTM1Q86UE6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LRRTM1Q86UE6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
LRRTM1Q86UE6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LRRTM1Q86UE6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 UPK3BP1-201ENST00000428678 509 ntBASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 AC108751.1-201ENST00000490852 363 ntBASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 BNIP3P1-202ENST00000550043 1585 ntBASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRTM1Q86UE6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 AL691432.1-201ENST00000596308 1422 ntBASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 AC148477.4-201ENST00000613430 1793 ntBASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 VN2R19P-201ENST00000442399 1052 ntBASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 PRYP6-201ENST00000514804 343 ntBASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms