Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AL805961.1-203ENST00000641078 1258 ntBASIC13.08□□□□□ -0.32
CSMD2Q7Z408 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 AC245100.5-201ENST00000452108 331 ntBASIC13.08□□□□□ -0.32
CSMD2Q7Z408 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 AC132938.4-201ENST00000623835 848 ntBASIC13.08□□□□□ -0.32
CSMD2Q7Z408 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.07□□□□□ -0.32
CSMD2Q7Z408 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 AC116345.2-201ENST00000512837 523 ntBASIC13.07□□□□□ -0.32
CSMD2Q7Z408 MIR4754-201ENST00000582477 89 ntBASIC13.07□□□□□ -0.32
CSMD2Q7Z408 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 AP003392.6-201ENST00000607709 325 ntBASIC13.07□□□□□ -0.32
CSMD2Q7Z408 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 AL138799.1-201ENST00000448213 1675 ntBASIC13.07□□□□□ -0.32
CSMD2Q7Z408 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 KLF2P2-201ENST00000416807 1039 ntBASIC13.07□□□□□ -0.32
CSMD2Q7Z408 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 AC092171.5-201ENST00000608012 942 ntBASIC13.07□□□□□ -0.32
CSMD2Q7Z408 AC051619.9-201ENST00000623237 597 ntBASIC13.07□□□□□ -0.32
CSMD2Q7Z408 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 FAU-202ENST00000434372 533 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD2Q7Z408 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 ALOX12P2-203ENST00000570921 1945 ntBASIC13.06□□□□□ -0.32
CSMD2Q7Z408 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 NOC2LP1-201ENST00000450578 752 ntBASIC13.06□□□□□ -0.32
CSMD2Q7Z408 RPL18P13-201ENST00000478088 569 ntBASIC13.06□□□□□ -0.32
CSMD2Q7Z408 AL157792.1-201ENST00000488281 530 ntBASIC13.06□□□□□ -0.32
CSMD2Q7Z408 AC106794.1-201ENST00000506935 792 ntBASIC13.06□□□□□ -0.32
CSMD2Q7Z408 MARK2P5-201ENST00000507649 634 ntBASIC13.06□□□□□ -0.32
CSMD2Q7Z408 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 AP001582.1-201ENST00000525856 295 ntBASIC13.06□□□□□ -0.32
CSMD2Q7Z408 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 AL118516.1-201ENST00000564152 670 ntBASIC13.06□□□□□ -0.32
CSMD2Q7Z408 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 AC004923.1-202ENST00000642106 209 ntBASIC13.06□□□□□ -0.32
CSMD2Q7Z408 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
CSMD2Q7Z408 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms