Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 ATP5G2P4-201ENST00000442175 420 ntBASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 IGHV3-71-201ENST00000523324 359 ntBASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 KRT17P8-201ENST00000540749 863 ntBASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 AC124283.3-201ENST00000570869 594 ntBASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 CU634019.7-201ENST00000624153 1185 ntBASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 FP236241.2-201ENST00000624906 1185 ntBASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 KRT8P22-201ENST00000562317 1415 ntBASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3BQ7Z3V4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 AC134915.1-201ENST00000426461 574 ntBASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3BQ7Z3V4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 AL162726.2-201ENST00000438986 1017 ntBASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 ACA64.2-201ENST00000459014 129 ntBASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 AC120045.2-201ENST00000567334 178 ntBASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
UBE3BQ7Z3V4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.64■□□□□ 0.74
UBE3BQ7Z3V4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBE3BQ7Z3V4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms