Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 AL589702.1-201ENST00000641229 1509 ntBASIC14.51□□□□□ -0.09
NIPAL3Q6P499 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.51□□□□□ -0.09
NIPAL3Q6P499 AC138035.3-201ENST00000622706 2791 ntBASIC14.51□□□□□ -0.09
NIPAL3Q6P499 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 LINC01225-203ENST00000563550 1244 ntBASIC14.5□□□□□ -0.09
NIPAL3Q6P499 SNHG9-202ENST00000564014 471 ntBASIC14.5□□□□□ -0.09
NIPAL3Q6P499 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 AL596442.2-201ENST00000610240 980 ntBASIC14.5□□□□□ -0.09
NIPAL3Q6P499 AL691403.2-201ENST00000618460 490 ntBASIC14.5□□□□□ -0.09
NIPAL3Q6P499 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
NIPAL3Q6P499 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.49□□□□□ -0.09
NIPAL3Q6P499 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms