Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 ZBED1P1-201ENST00000502364 1930 ntBASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 BANF1P1-201ENST00000553684 263 ntBASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 RARRES2P9-201ENST00000565168 469 ntBASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CDKAL1Q5VV42 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKAL1Q5VV42 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.33■□□□□ 0.37
CDKAL1Q5VV42 AL390755.1-201ENST00000623716 2027 ntBASIC17.33■□□□□ 0.37
CDKAL1Q5VV42 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CDKAL1Q5VV42 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKAL1Q5VV42 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKAL1Q5VV42 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKAL1Q5VV42 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKAL1Q5VV42 MROH4P-201ENST00000431302 1578 ntBASIC17.33■□□□□ 0.37
CDKAL1Q5VV42 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CDKAL1Q5VV42 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKAL1Q5VV42 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 YBX2P1-201ENST00000394192 760 ntBASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 FGD5P1-202ENST00000614866 2498 ntBASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKAL1Q5VV42 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 HIST3H2BA-201ENST00000436555 524 ntBASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 TIMM8BP1-201ENST00000452384 211 ntBASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 IGHV3-62-201ENST00000520057 340 ntBASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms