Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 HINT2P1-201ENST00000419438 481 ntBASIC19.65■□□□□ 0.74
RC3H1Q5TC82 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 AC138649.2-201ENST00000615886 705 ntBASIC19.65■□□□□ 0.74
RC3H1Q5TC82 AC091812.3-201ENST00000621362 345 ntBASIC19.65■□□□□ 0.74
RC3H1Q5TC82 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.74
RC3H1Q5TC82 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RC3H1Q5TC82 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RC3H1Q5TC82 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RC3H1Q5TC82 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.64■□□□□ 0.74
RC3H1Q5TC82 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RC3H1Q5TC82 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.64■□□□□ 0.73
RC3H1Q5TC82 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 IMP3P2-201ENST00000489760 475 ntBASIC19.64■□□□□ 0.73
RC3H1Q5TC82 COX5BP1-201ENST00000507622 393 ntBASIC19.64■□□□□ 0.73
RC3H1Q5TC82 AC044849.1-201ENST00000519737 1188 ntBASIC19.64■□□□□ 0.73
RC3H1Q5TC82 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RC3H1Q5TC82 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.63■□□□□ 0.73
RC3H1Q5TC82 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 LRRC59-203ENST00000576448 1531 ntBASIC19.63■□□□□ 0.73
RC3H1Q5TC82 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 TUBBP5-203ENST00000508529 1334 ntBASIC19.63■□□□□ 0.73
RC3H1Q5TC82 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 AL008707.1-201ENST00000422498 534 ntBASIC19.63■□□□□ 0.73
RC3H1Q5TC82 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 RN7SL713P-201ENST00000582127 302 ntBASIC19.63■□□□□ 0.73
RC3H1Q5TC82 MIR4706-201ENST00000582134 82 ntBASIC19.63■□□□□ 0.73
RC3H1Q5TC82 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RC3H1Q5TC82 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 KRT8P14-201ENST00000414254 1442 ntBASIC19.62■□□□□ 0.73
RC3H1Q5TC82 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 MIR769-201ENST00000390225 118 ntBASIC19.62■□□□□ 0.73
RC3H1Q5TC82 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 MPRIPP1-201ENST00000452433 1089 ntBASIC19.62■□□□□ 0.73
RC3H1Q5TC82 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms