Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.34■□□□□ 0.21
SCAPQ12770 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAPQ12770 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.34■□□□□ 0.21
SCAPQ12770 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCAPQ12770 AP003680.1-201ENST00000598970 3660 ntBASIC16.34■□□□□ 0.21
SCAPQ12770 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAPQ12770 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.34■□□□□ 0.21
SCAPQ12770 AC022144.1-201ENST00000602255 1580 ntBASIC16.34■□□□□ 0.21
SCAPQ12770 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
SCAPQ12770 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCAPQ12770 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SCAPQ12770 AC092850.2-201ENST00000623821 2697 ntBASIC16.33■□□□□ 0.21
SCAPQ12770 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCAPQ12770 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SCAPQ12770 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
SCAPQ12770 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCAPQ12770 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SCAPQ12770 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
SCAPQ12770 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAPQ12770 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SCAPQ12770 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAPQ12770 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAPQ12770 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAPQ12770 IGHV3-71-201ENST00000523324 359 ntBASIC16.33■□□□□ 0.2
SCAPQ12770 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.33■□□□□ 0.2
SCAPQ12770 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.33■□□□□ 0.2
SCAPQ12770 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SCAPQ12770 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.33■□□□□ 0.2
SCAPQ12770 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.33■□□□□ 0.2
SCAPQ12770 AC092337.1-201ENST00000568699 1129 ntBASIC16.33■□□□□ 0.2
SCAPQ12770 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.33■□□□□ 0.2
SCAPQ12770 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.33■□□□□ 0.2
SCAPQ12770 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.33■□□□□ 0.2
SCAPQ12770 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCAPQ12770 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.33■□□□□ 0.2
SCAPQ12770 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
SCAPQ12770 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.33■□□□□ 0.2
SCAPQ12770 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAPQ12770 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAPQ12770 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.33■□□□□ 0.2
SCAPQ12770 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCAPQ12770 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAPQ12770 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.33■□□□□ 0.2
SCAPQ12770 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAPQ12770 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAPQ12770 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAPQ12770 AC090616.6-203ENST00000579186 1945 ntBASIC16.33■□□□□ 0.2
SCAPQ12770 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SCAPQ12770 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SCAPQ12770 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.32■□□□□ 0.2
SCAPQ12770 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.32■□□□□ 0.2
SCAPQ12770 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SCAPQ12770 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SCAPQ12770 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.32■□□□□ 0.2
SCAPQ12770 TOMM22P5-201ENST00000416399 439 ntBASIC16.32■□□□□ 0.2
SCAPQ12770 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.32■□□□□ 0.2
SCAPQ12770 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.32■□□□□ 0.2
SCAPQ12770 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.32■□□□□ 0.2
SCAPQ12770 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SCAPQ12770 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.32■□□□□ 0.2
SCAPQ12770 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.32■□□□□ 0.2
SCAPQ12770 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.32■□□□□ 0.2
SCAPQ12770 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SCAPQ12770 LINC01115-203ENST00000606068 577 ntBASIC16.32■□□□□ 0.2
SCAPQ12770 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAPQ12770 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCAPQ12770 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCAPQ12770 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SCAPQ12770 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAPQ12770 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.31■□□□□ 0.2
SCAPQ12770 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAPQ12770 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAPQ12770 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAPQ12770 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SCAPQ12770 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 MRPS18AP1-201ENST00000414458 589 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms