Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDR1Q08345 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
DDR1Q08345 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDR1Q08345 AC124067.4-201ENST00000519691 2379 ntBASIC19.42■□□□□ 0.7
DDR1Q08345 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
DDR1Q08345 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDR1Q08345 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
DDR1Q08345 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.41■□□□□ 0.7
DDR1Q08345 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
DDR1Q08345 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.41■□□□□ 0.7
DDR1Q08345 AC253536.4-201ENST00000440539 267 ntBASIC19.41■□□□□ 0.7
DDR1Q08345 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.41■□□□□ 0.7
DDR1Q08345 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.41■□□□□ 0.7
DDR1Q08345 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 SERPINA13P-202ENST00000478994 924 ntBASIC19.41■□□□□ 0.7
DDR1Q08345 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.41■□□□□ 0.7
DDR1Q08345 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
DDR1Q08345 AC005730.2-201ENST00000564549 1184 ntBASIC19.41■□□□□ 0.7
DDR1Q08345 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.41■□□□□ 0.7
DDR1Q08345 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.41■□□□□ 0.7
DDR1Q08345 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.41■□□□□ 0.7
DDR1Q08345 AC138649.2-201ENST00000615886 705 ntBASIC19.41■□□□□ 0.7
DDR1Q08345 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
DDR1Q08345 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.41■□□□□ 0.7
DDR1Q08345 AL139384.1-201ENST00000612143 3047 ntBASIC19.41■□□□□ 0.7
DDR1Q08345 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
DDR1Q08345 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.41■□□□□ 0.7
DDR1Q08345 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
DDR1Q08345 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDR1Q08345 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
DDR1Q08345 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
DDR1Q08345 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
DDR1Q08345 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.4■□□□□ 0.7
DDR1Q08345 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
DDR1Q08345 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.4■□□□□ 0.7
DDR1Q08345 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.4■□□□□ 0.7
DDR1Q08345 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.4■□□□□ 0.7
DDR1Q08345 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
DDR1Q08345 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
DDR1Q08345 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.4■□□□□ 0.7
DDR1Q08345 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
DDR1Q08345 MPV17-204ENST00000399052 749 ntTSL 4 BASIC19.4■□□□□ 0.7
DDR1Q08345 AC079178.1-201ENST00000420915 656 ntBASIC19.4■□□□□ 0.7
DDR1Q08345 AC114812.1-204ENST00000449669 728 ntBASIC19.4■□□□□ 0.7
DDR1Q08345 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
DDR1Q08345 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19.4■□□□□ 0.7
DDR1Q08345 CU633904.3-201ENST00000624042 1029 ntBASIC19.4■□□□□ 0.7
DDR1Q08345 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.4■□□□□ 0.7
DDR1Q08345 AC092978.1-202ENST00000637590 1327 ntBASIC19.4■□□□□ 0.7
DDR1Q08345 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.4■□□□□ 0.7
DDR1Q08345 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.4■□□□□ 0.7
DDR1Q08345 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
DDR1Q08345 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.4■□□□□ 0.7
DDR1Q08345 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDR1Q08345 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.39■□□□□ 0.7
DDR1Q08345 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DDR1Q08345 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
DDR1Q08345 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DDR1Q08345 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDR1Q08345 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.39■□□□□ 0.69
DDR1Q08345 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDR1Q08345 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDR1Q08345 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDR1Q08345 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDR1Q08345 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDR1Q08345 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDR1Q08345 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms