Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.32■□□□□ 0.68
SCN7AQ01118 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.32■□□□□ 0.68
SCN7AQ01118 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.32■□□□□ 0.68
SCN7AQ01118 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.32■□□□□ 0.68
SCN7AQ01118 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN7AQ01118 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN7AQ01118 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN7AQ01118 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN7AQ01118 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.32■□□□□ 0.68
SCN7AQ01118 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.32■□□□□ 0.68
SCN7AQ01118 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.32■□□□□ 0.68
SCN7AQ01118 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN7AQ01118 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.32■□□□□ 0.68
SCN7AQ01118 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.32■□□□□ 0.68
SCN7AQ01118 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.32■□□□□ 0.68
SCN7AQ01118 AC126915.1-201ENST00000522847 1038 ntBASIC19.32■□□□□ 0.68
SCN7AQ01118 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.32■□□□□ 0.68
SCN7AQ01118 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.32■□□□□ 0.68
SCN7AQ01118 AC016629.1-201ENST00000596579 586 ntBASIC19.32■□□□□ 0.68
SCN7AQ01118 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SCN7AQ01118 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN7AQ01118 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.32■□□□□ 0.68
SCN7AQ01118 AC007787.1-201ENST00000588095 1583 ntBASIC19.32■□□□□ 0.68
SCN7AQ01118 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN7AQ01118 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SCN7AQ01118 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN7AQ01118 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
SCN7AQ01118 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN7AQ01118 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.31■□□□□ 0.68
SCN7AQ01118 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN7AQ01118 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN7AQ01118 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN7AQ01118 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN7AQ01118 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN7AQ01118 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
SCN7AQ01118 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN7AQ01118 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
SCN7AQ01118 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SCN7AQ01118 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.31■□□□□ 0.68
SCN7AQ01118 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN7AQ01118 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.31■□□□□ 0.68
SCN7AQ01118 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN7AQ01118 NKAIN1P1-201ENST00000435754 582 ntBASIC19.31■□□□□ 0.68
SCN7AQ01118 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.31■□□□□ 0.68
SCN7AQ01118 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
SCN7AQ01118 SPTLC1P5-201ENST00000450718 252 ntBASIC19.31■□□□□ 0.68
SCN7AQ01118 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.31■□□□□ 0.68
SCN7AQ01118 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.31■□□□□ 0.68
SCN7AQ01118 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN7AQ01118 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN7AQ01118 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN7AQ01118 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN7AQ01118 AL645939.5-201ENST00000606834 243 ntBASIC19.31■□□□□ 0.68
SCN7AQ01118 AC244452.3-201ENST00000636814 210 ntBASIC19.31■□□□□ 0.68
SCN7AQ01118 AC026471.1-201ENST00000564629 3026 ntBASIC19.31■□□□□ 0.68
SCN7AQ01118 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.31■□□□□ 0.68
SCN7AQ01118 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.31■□□□□ 0.68
SCN7AQ01118 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN7AQ01118 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN7AQ01118 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.31■□□□□ 0.68
SCN7AQ01118 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN7AQ01118 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN7AQ01118 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN7AQ01118 AC018695.7-201ENST00000624587 2492 ntBASIC19.31■□□□□ 0.68
SCN7AQ01118 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN7AQ01118 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
SCN7AQ01118 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SCN7AQ01118 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
SCN7AQ01118 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SCN7AQ01118 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SCN7AQ01118 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCN7AQ01118 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN7AQ01118 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCN7AQ01118 AL662890.1-201ENST00000396818 632 ntBASIC19.3■□□□□ 0.68
SCN7AQ01118 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.3■□□□□ 0.68
SCN7AQ01118 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.3■□□□□ 0.68
SCN7AQ01118 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SCN7AQ01118 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.3■□□□□ 0.68
SCN7AQ01118 MIR4783-201ENST00000580343 82 ntBASIC19.3■□□□□ 0.68
SCN7AQ01118 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.3■□□□□ 0.68
SCN7AQ01118 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN7AQ01118 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SCN7AQ01118 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
SCN7AQ01118 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.3■□□□□ 0.68
SCN7AQ01118 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCN7AQ01118 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN7AQ01118 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.3■□□□□ 0.68
SCN7AQ01118 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.3■□□□□ 0.68
SCN7AQ01118 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCN7AQ01118 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
SCN7AQ01118 HINT2P1-201ENST00000419438 481 ntBASIC19.3■□□□□ 0.68
SCN7AQ01118 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN7AQ01118 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN7AQ01118 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC19.3■□□□□ 0.68
SCN7AQ01118 AL603764.1-201ENST00000636452 321 ntBASIC19.3■□□□□ 0.68
SCN7AQ01118 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.29■□□□□ 0.68
SCN7AQ01118 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN7AQ01118 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SCN7AQ01118 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.29■□□□□ 0.68
SCN7AQ01118 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms