Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.63■□□□□ 0.25
CBX1P83916 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CBX1P83916 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.63■□□□□ 0.25
CBX1P83916 UBE2SP1-201ENST00000450587 669 ntBASIC16.63■□□□□ 0.25
CBX1P83916 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.63■□□□□ 0.25
CBX1P83916 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.63■□□□□ 0.25
CBX1P83916 AC111152.3-201ENST00000569699 673 ntBASIC16.63■□□□□ 0.25
CBX1P83916 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC16.63■□□□□ 0.25
CBX1P83916 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.63■□□□□ 0.25
CBX1P83916 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.63■□□□□ 0.25
CBX1P83916 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CBX1P83916 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.63■□□□□ 0.25
CBX1P83916 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX1P83916 KRT8P39-201ENST00000396270 1433 ntBASIC16.62■□□□□ 0.25
CBX1P83916 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX1P83916 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.62■□□□□ 0.25
CBX1P83916 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC16.62■□□□□ 0.25
CBX1P83916 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.62■□□□□ 0.25
CBX1P83916 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX1P83916 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CBX1P83916 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX1P83916 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CBX1P83916 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX1P83916 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CBX1P83916 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.62■□□□□ 0.25
CBX1P83916 AP003041.3-201ENST00000527151 707 ntBASIC16.62■□□□□ 0.25
CBX1P83916 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.62■□□□□ 0.25
CBX1P83916 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.62■□□□□ 0.25
CBX1P83916 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.62■□□□□ 0.25
CBX1P83916 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CBX1P83916 AC004263.2-201ENST00000617183 678 ntBASIC16.62■□□□□ 0.25
CBX1P83916 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CBX1P83916 AC073912.3-201ENST00000624414 853 ntBASIC16.62■□□□□ 0.25
CBX1P83916 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC16.62■□□□□ 0.25
CBX1P83916 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX1P83916 AC097374.2-201ENST00000618617 1306 ntBASIC16.62■□□□□ 0.25
CBX1P83916 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX1P83916 AC079776.2-201ENST00000641154 1609 ntBASIC16.62■□□□□ 0.25
CBX1P83916 AC113367.3-201ENST00000508316 1912 ntBASIC16.62■□□□□ 0.25
CBX1P83916 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CBX1P83916 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBX1P83916 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBX1P83916 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX1P83916 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBX1P83916 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC16.62■□□□□ 0.25
CBX1P83916 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CBX1P83916 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CBX1P83916 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBX1P83916 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX1P83916 KRT8P10-201ENST00000450021 1447 ntBASIC16.62■□□□□ 0.25
CBX1P83916 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX1P83916 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX1P83916 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX1P83916 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX1P83916 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CBX1P83916 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX1P83916 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CBX1P83916 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CBX1P83916 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX1P83916 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX1P83916 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CBX1P83916 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CBX1P83916 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.61■□□□□ 0.25
CBX1P83916 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CBX1P83916 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CBX1P83916 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX1P83916 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.61■□□□□ 0.25
CBX1P83916 MTCL1P1-201ENST00000446207 792 ntBASIC16.61■□□□□ 0.25
CBX1P83916 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CBX1P83916 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.61■□□□□ 0.25
CBX1P83916 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.61■□□□□ 0.25
CBX1P83916 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.61■□□□□ 0.25
CBX1P83916 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.61■□□□□ 0.25
CBX1P83916 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CBX1P83916 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.61■□□□□ 0.25
CBX1P83916 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CBX1P83916 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.61■□□□□ 0.25
CBX1P83916 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CBX1P83916 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.61■□□□□ 0.25
CBX1P83916 AC104771.1-201ENST00000603335 964 ntBASIC16.61■□□□□ 0.25
CBX1P83916 AC024243.1-201ENST00000609234 778 ntBASIC16.61■□□□□ 0.25
CBX1P83916 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CBX1P83916 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms