Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC22.24■■□□□ 1.15
CLTCL1P53675 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 AC245100.3-201ENST00000441281 285 ntBASIC22.24■■□□□ 1.15
CLTCL1P53675 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 IGHJ2P-201ENST00000454480 60 ntBASIC22.24■■□□□ 1.15
CLTCL1P53675 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
CLTCL1P53675 ACTG1P17-201ENST00000558391 1119 ntBASIC22.24■■□□□ 1.15
CLTCL1P53675 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC22.24■■□□□ 1.15
CLTCL1P53675 AC103810.3-201ENST00000583567 96 ntBASIC22.24■■□□□ 1.15
CLTCL1P53675 ENPP7P14-201ENST00000621765 1040 ntBASIC22.24■■□□□ 1.15
CLTCL1P53675 AC132938.4-201ENST00000623835 848 ntBASIC22.24■■□□□ 1.15
CLTCL1P53675 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC22.24■■□□□ 1.15
CLTCL1P53675 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC22.24■■□□□ 1.15
CLTCL1P53675 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLTCL1P53675 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLTCL1P53675 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC22.23■■□□□ 1.15
CLTCL1P53675 AC127383.1-201ENST00000444697 1800 ntBASIC22.23■■□□□ 1.15
CLTCL1P53675 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLTCL1P53675 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLTCL1P53675 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLTCL1P53675 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLTCL1P53675 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLTCL1P53675 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
CLTCL1P53675 ACE-203ENST00000413513 2237 ntTSL 2 BASIC22.23■■□□□ 1.15
CLTCL1P53675 RPS3-201ENST00000278572 907 ntTSL 3 BASIC22.23■■□□□ 1.15
CLTCL1P53675 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLTCL1P53675 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CLTCL1P53675 TISP43-201ENST00000409793 538 ntTSL 4 BASIC22.23■■□□□ 1.15
CLTCL1P53675 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC22.23■■□□□ 1.15
CLTCL1P53675 CALR4P-201ENST00000431943 946 ntBASIC22.23■■□□□ 1.15
CLTCL1P53675 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC22.23■■□□□ 1.15
CLTCL1P53675 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
CLTCL1P53675 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
CLTCL1P53675 AC068587.10-201ENST00000641210 219 ntBASIC22.23■■□□□ 1.15
CLTCL1P53675 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLTCL1P53675 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLTCL1P53675 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLTCL1P53675 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLTCL1P53675 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC22.22■■□□□ 1.15
CLTCL1P53675 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CLTCL1P53675 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLTCL1P53675 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
CLTCL1P53675 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLTCL1P53675 LSM5-207ENST00000410044 687 ntTSL 3 BASIC22.22■■□□□ 1.15
CLTCL1P53675 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC22.22■■□□□ 1.15
CLTCL1P53675 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC22.22■■□□□ 1.15
CLTCL1P53675 KRT8P13-201ENST00000463294 1010 ntBASIC22.22■■□□□ 1.15
CLTCL1P53675 OARD1-212ENST00000482515 832 ntTSL 2 BASIC22.22■■□□□ 1.15
CLTCL1P53675 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
CLTCL1P53675 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC22.22■■□□□ 1.15
CLTCL1P53675 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLTCL1P53675 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC22.22■■□□□ 1.15
CLTCL1P53675 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC22.22■■□□□ 1.15
CLTCL1P53675 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLTCL1P53675 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CLTCL1P53675 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC22.22■■□□□ 1.15
CLTCL1P53675 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC22.22■■□□□ 1.15
CLTCL1P53675 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC22.22■■□□□ 1.15
CLTCL1P53675 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CLTCL1P53675 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC22.22■■□□□ 1.15
CLTCL1P53675 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CLTCL1P53675 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC22.21■■□□□ 1.15
CLTCL1P53675 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 SNX21-203ENST00000372541 771 ntTSL 2 BASIC22.21■■□□□ 1.15
CLTCL1P53675 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CLTCL1P53675 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC22.21■■□□□ 1.15
CLTCL1P53675 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CLTCL1P53675 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 APOA2-204ENST00000464492 530 ntTSL 3 BASIC22.21■■□□□ 1.15
CLTCL1P53675 AC004066.1-201ENST00000502488 802 ntBASIC22.21■■□□□ 1.15
CLTCL1P53675 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC22.21■■□□□ 1.15
CLTCL1P53675 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC22.21■■□□□ 1.15
CLTCL1P53675 AL391280.1-201ENST00000506969 1062 ntBASIC22.21■■□□□ 1.15
CLTCL1P53675 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC22.21■■□□□ 1.15
CLTCL1P53675 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC22.21■■□□□ 1.15
CLTCL1P53675 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC22.21■■□□□ 1.15
CLTCL1P53675 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CLTCL1P53675 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC22.21■■□□□ 1.15
CLTCL1P53675 AL021578.1-201ENST00000613646 709 ntBASIC22.21■■□□□ 1.15
CLTCL1P53675 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 LRRC59-203ENST00000576448 1531 ntBASIC22.21■■□□□ 1.15
CLTCL1P53675 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 SUPT20HL2-201ENST00000486479 2409 ntBASIC22.21■■□□□ 1.15
CLTCL1P53675 WT1-209ENST00000530998 2421 ntTSL 2 BASIC22.21■■□□□ 1.15
CLTCL1P53675 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC22.21■■□□□ 1.15
CLTCL1P53675 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLTCL1P53675 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms