Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-5P52952 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.53□□□□□ -0.24
NKX2-5P52952 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-5P52952 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX2-5P52952 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-5P52952 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX2-5P52952 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX2-5P52952 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-5P52952 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX2-5P52952 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX2-5P52952 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-5P52952 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NKX2-5P52952 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-5P52952 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-5P52952 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX2-5P52952 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-5P52952 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-5P52952 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-5P52952 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-5P52952 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-5P52952 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-5P52952 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.52□□□□□ -0.24
NKX2-5P52952 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-5P52952 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-5P52952 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-5P52952 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
NKX2-5P52952 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.24
NKX2-5P52952 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NKX2-5P52952 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX2-5P52952 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NKX2-5P52952 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX2-5P52952 PVRIG2P-201ENST00000435460 978 ntBASIC13.52□□□□□ -0.25
NKX2-5P52952 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.52□□□□□ -0.25
NKX2-5P52952 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.52□□□□□ -0.25
NKX2-5P52952 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX2-5P52952 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX2-5P52952 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.52□□□□□ -0.25
NKX2-5P52952 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX2-5P52952 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.52□□□□□ -0.25
NKX2-5P52952 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NKX2-5P52952 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NKX2-5P52952 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NKX2-5P52952 AL592424.1-201ENST00000563624 1536 ntBASIC13.52□□□□□ -0.25
NKX2-5P52952 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NKX2-5P52952 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX2-5P52952 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX2-5P52952 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NKX2-5P52952 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
NKX2-5P52952 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.52□□□□□ -0.25
NKX2-5P52952 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NKX2-5P52952 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-5P52952 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NKX2-5P52952 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NKX2-5P52952 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
NKX2-5P52952 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.51□□□□□ -0.25
NKX2-5P52952 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.51□□□□□ -0.25
NKX2-5P52952 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.51□□□□□ -0.25
NKX2-5P52952 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.51□□□□□ -0.25
NKX2-5P52952 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NKX2-5P52952 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 KRT8P39-201ENST00000396270 1433 ntBASIC13.51□□□□□ -0.25
NKX2-5P52952 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NKX2-5P52952 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX2-5P52952 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.51□□□□□ -0.25
NKX2-5P52952 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms