Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.36■□□□□ 0.37
CLCN3P51790 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.36■□□□□ 0.37
CLCN3P51790 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.36■□□□□ 0.37
CLCN3P51790 ACA64.2-201ENST00000459014 129 ntBASIC17.36■□□□□ 0.37
CLCN3P51790 VDAC1P7-201ENST00000462417 847 ntBASIC17.36■□□□□ 0.37
CLCN3P51790 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN3P51790 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN3P51790 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLCN3P51790 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.36■□□□□ 0.37
CLCN3P51790 CU634019.7-201ENST00000624153 1185 ntBASIC17.36■□□□□ 0.37
CLCN3P51790 FP236241.2-201ENST00000624906 1185 ntBASIC17.36■□□□□ 0.37
CLCN3P51790 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 KRT8P22-201ENST00000562317 1415 ntBASIC17.36■□□□□ 0.37
CLCN3P51790 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLCN3P51790 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN3P51790 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.36■□□□□ 0.37
CLCN3P51790 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLCN3P51790 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCN3P51790 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN3P51790 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN3P51790 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN3P51790 INTS4P2-202ENST00000614726 2019 ntBASIC17.35■□□□□ 0.37
CLCN3P51790 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
CLCN3P51790 AL118508.1-201ENST00000613502 2345 ntBASIC17.35■□□□□ 0.37
CLCN3P51790 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLCN3P51790 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN3P51790 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLCN3P51790 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLCN3P51790 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN3P51790 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN3P51790 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN3P51790 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN3P51790 KRT18P43-201ENST00000469825 1281 ntBASIC17.35■□□□□ 0.37
CLCN3P51790 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.35■□□□□ 0.37
CLCN3P51790 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCN3P51790 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.35■□□□□ 0.37
CLCN3P51790 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLCN3P51790 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN3P51790 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCN3P51790 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CLCN3P51790 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN3P51790 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
CLCN3P51790 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN3P51790 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.35■□□□□ 0.37
CLCN3P51790 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.35■□□□□ 0.37
CLCN3P51790 AC024909.3-201ENST00000611513 2257 ntBASIC17.35■□□□□ 0.37
CLCN3P51790 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCN3P51790 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCN3P51790 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLCN3P51790 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CLCN3P51790 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCN3P51790 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.34■□□□□ 0.37
CLCN3P51790 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLCN3P51790 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLCN3P51790 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCN3P51790 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.34■□□□□ 0.37
CLCN3P51790 AL162726.2-201ENST00000438986 1017 ntBASIC17.34■□□□□ 0.37
CLCN3P51790 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.34■□□□□ 0.37
CLCN3P51790 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.34■□□□□ 0.37
CLCN3P51790 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.34■□□□□ 0.37
CLCN3P51790 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.34■□□□□ 0.37
CLCN3P51790 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.34■□□□□ 0.37
CLCN3P51790 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.34■□□□□ 0.37
CLCN3P51790 RAB43P1-201ENST00000561790 589 ntBASIC17.34■□□□□ 0.37
CLCN3P51790 AC124283.3-201ENST00000570869 594 ntBASIC17.34■□□□□ 0.37
CLCN3P51790 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCN3P51790 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.34■□□□□ 0.37
CLCN3P51790 AL359881.2-201ENST00000602973 570 ntBASIC17.34■□□□□ 0.37
CLCN3P51790 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCN3P51790 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.34■□□□□ 0.37
CLCN3P51790 CYP2T1P-202ENST00000641596 2535 ntBASIC17.34■□□□□ 0.37
CLCN3P51790 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.34■□□□□ 0.37
CLCN3P51790 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN3P51790 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms