Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SRP9P49458 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.17□□□□□ -0.14
SRP9P49458 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.17□□□□□ -0.14
SRP9P49458 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.17□□□□□ -0.14
SRP9P49458 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 BX842568.4-201ENST00000421222 227 ntBASIC14.17□□□□□ -0.14
SRP9P49458 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.17□□□□□ -0.14
SRP9P49458 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SRP9P49458 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.17□□□□□ -0.14
SRP9P49458 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.17□□□□□ -0.14
SRP9P49458 AL161645.1-201ENST00000622716 1255 ntBASIC14.17□□□□□ -0.14
SRP9P49458 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.17□□□□□ -0.14
SRP9P49458 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRP9P49458 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.16□□□□□ -0.14
SRP9P49458 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.16□□□□□ -0.14
SRP9P49458 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SRP9P49458 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.16□□□□□ -0.14
SRP9P49458 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.16□□□□□ -0.14
SRP9P49458 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SRP9P49458 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.16□□□□□ -0.14
SRP9P49458 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.16□□□□□ -0.14
SRP9P49458 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.16□□□□□ -0.14
SRP9P49458 AC109635.5-201ENST00000533593 962 ntBASIC14.16□□□□□ -0.14
SRP9P49458 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SRP9P49458 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.16□□□□□ -0.14
SRP9P49458 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.16□□□□□ -0.14
SRP9P49458 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.16□□□□□ -0.14
SRP9P49458 AL009183.1-201ENST00000603760 355 ntBASIC14.16□□□□□ -0.14
SRP9P49458 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.16□□□□□ -0.14
SRP9P49458 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SRP9P49458 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SRP9P49458 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SRP9P49458 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.16□□□□□ -0.14
SRP9P49458 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.16□□□□□ -0.14
SRP9P49458 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.16□□□□□ -0.14
SRP9P49458 PCGF3-213ENST00000620529 1899 ntBASIC14.16□□□□□ -0.14
SRP9P49458 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SRP9P49458 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms