Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.55■□□□□ 0.4
CENPFP49454 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.55■□□□□ 0.4
CENPFP49454 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.55■□□□□ 0.4
CENPFP49454 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 AC009090.5-201ENST00000624886 2285 ntBASIC17.55■□□□□ 0.4
CENPFP49454 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CENPFP49454 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.55■□□□□ 0.4
CENPFP49454 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.55■□□□□ 0.4
CENPFP49454 AC026316.1-201ENST00000398900 414 ntBASIC17.55■□□□□ 0.4
CENPFP49454 AC013355.1-201ENST00000562625 723 ntBASIC17.55■□□□□ 0.4
CENPFP49454 PRSS30P-206ENST00000641773 873 ntBASIC17.55■□□□□ 0.4
CENPFP49454 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CENPFP49454 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.55■□□□□ 0.4
CENPFP49454 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CENPFP49454 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CENPFP49454 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.55■□□□□ 0.4
CENPFP49454 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPFP49454 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPFP49454 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPFP49454 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPFP49454 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPFP49454 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.54■□□□□ 0.4
CENPFP49454 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPFP49454 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.54■□□□□ 0.4
CENPFP49454 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CENPFP49454 RN7SL713P-201ENST00000582127 302 ntBASIC17.54■□□□□ 0.4
CENPFP49454 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.54■□□□□ 0.4
CENPFP49454 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.54■□□□□ 0.4
CENPFP49454 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CENPFP49454 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.54■□□□□ 0.4
CENPFP49454 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPFP49454 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CENPFP49454 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPFP49454 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.54■□□□□ 0.4
CENPFP49454 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.54■□□□□ 0.4
CENPFP49454 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.54■□□□□ 0.4
CENPFP49454 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.54■□□□□ 0.4
CENPFP49454 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CENPFP49454 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.54■□□□□ 0.4
CENPFP49454 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.54■□□□□ 0.4
CENPFP49454 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CENPFP49454 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.54■□□□□ 0.4
CENPFP49454 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.53■□□□□ 0.4
CENPFP49454 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.53■□□□□ 0.4
CENPFP49454 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CENPFP49454 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.53■□□□□ 0.4
CENPFP49454 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CENPFP49454 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.53■□□□□ 0.4
CENPFP49454 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.53■□□□□ 0.4
CENPFP49454 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CENPFP49454 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CENPFP49454 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.53■□□□□ 0.4
CENPFP49454 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.53■□□□□ 0.4
CENPFP49454 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.53■□□□□ 0.4
CENPFP49454 AC079178.1-201ENST00000420915 656 ntBASIC17.53■□□□□ 0.4
CENPFP49454 AL354877.1-201ENST00000424412 413 ntBASIC17.53■□□□□ 0.4
CENPFP49454 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.53■□□□□ 0.4
CENPFP49454 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.53■□□□□ 0.4
CENPFP49454 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.53■□□□□ 0.4
CENPFP49454 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CENPFP49454 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.53■□□□□ 0.4
CENPFP49454 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CENPFP49454 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.53■□□□□ 0.4
CENPFP49454 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CENPFP49454 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.53■□□□□ 0.4
CENPFP49454 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CENPFP49454 RNU1-114P-201ENST00000365297 166 ntBASIC17.53■□□□□ 0.4
CENPFP49454 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC17.53■□□□□ 0.4
CENPFP49454 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CENPFP49454 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CENPFP49454 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms