Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.83■□□□□ 0.12
CSNK1DP48730 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.83■□□□□ 0.12
CSNK1DP48730 AC027307.3-201ENST00000594262 1100 ntBASIC15.83■□□□□ 0.12
CSNK1DP48730 CHCHD2P3-201ENST00000603038 451 ntBASIC15.83■□□□□ 0.12
CSNK1DP48730 TMEM261P1-201ENST00000604899 340 ntBASIC15.83■□□□□ 0.12
CSNK1DP48730 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.83■□□□□ 0.12
CSNK1DP48730 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1DP48730 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1DP48730 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.83■□□□□ 0.12
CSNK1DP48730 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.83■□□□□ 0.12
CSNK1DP48730 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1DP48730 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1DP48730 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1DP48730 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1DP48730 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1DP48730 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.83■□□□□ 0.12
CSNK1DP48730 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1DP48730 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1DP48730 CROCCP1-201ENST00000426910 5675 ntBASIC15.83■□□□□ 0.12
CSNK1DP48730 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CSNK1DP48730 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.82■□□□□ 0.12
CSNK1DP48730 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
CSNK1DP48730 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1DP48730 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1DP48730 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CSNK1DP48730 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.82■□□□□ 0.12
CSNK1DP48730 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.82■□□□□ 0.12
CSNK1DP48730 LINC02084-201ENST00000606069 1096 ntBASIC15.82■□□□□ 0.12
CSNK1DP48730 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.82■□□□□ 0.12
CSNK1DP48730 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CSNK1DP48730 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.82■□□□□ 0.12
CSNK1DP48730 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 LINC02199-201ENST00000506655 2702 ntBASIC15.82■□□□□ 0.12
CSNK1DP48730 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CSNK1DP48730 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CSNK1DP48730 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CSNK1DP48730 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CSNK1DP48730 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CSNK1DP48730 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1DP48730 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1DP48730 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CSNK1DP48730 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CSNK1DP48730 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1DP48730 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CSNK1DP48730 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1DP48730 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1DP48730 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.81■□□□□ 0.12
CSNK1DP48730 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.81■□□□□ 0.12
CSNK1DP48730 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1DP48730 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CSNK1DP48730 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1DP48730 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.81■□□□□ 0.12
CSNK1DP48730 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.81■□□□□ 0.12
CSNK1DP48730 FAM86LP-201ENST00000478302 853 ntBASIC15.81■□□□□ 0.12
CSNK1DP48730 AC104596.2-201ENST00000512793 793 ntBASIC15.81■□□□□ 0.12
CSNK1DP48730 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CSNK1DP48730 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.81■□□□□ 0.12
CSNK1DP48730 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1DP48730 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.81■□□□□ 0.12
CSNK1DP48730 AC123567.1-201ENST00000548294 1261 ntBASIC15.81■□□□□ 0.12
CSNK1DP48730 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1DP48730 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.81■□□□□ 0.12
CSNK1DP48730 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.81■□□□□ 0.12
CSNK1DP48730 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CSNK1DP48730 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CSNK1DP48730 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1DP48730 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CSNK1DP48730 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1DP48730 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1DP48730 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CSNK1DP48730 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1DP48730 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1DP48730 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.81■□□□□ 0.12
CSNK1DP48730 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.81■□□□□ 0.12
CSNK1DP48730 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSNK1DP48730 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSNK1DP48730 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms