Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.73■□□□□ 0.43
TM4SF4P48230 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF4P48230 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF4P48230 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TM4SF4P48230 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF4P48230 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
TM4SF4P48230 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
TM4SF4P48230 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF4P48230 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF4P48230 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.72■□□□□ 0.43
TM4SF4P48230 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.72■□□□□ 0.43
TM4SF4P48230 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF4P48230 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF4P48230 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.72■□□□□ 0.43
TM4SF4P48230 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TM4SF4P48230 AC116345.2-201ENST00000512837 523 ntBASIC17.72■□□□□ 0.43
TM4SF4P48230 IGLV3-15-201ENST00000518356 244 ntBASIC17.72■□□□□ 0.43
TM4SF4P48230 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
TM4SF4P48230 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.72■□□□□ 0.43
TM4SF4P48230 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TM4SF4P48230 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.72■□□□□ 0.43
TM4SF4P48230 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.72■□□□□ 0.43
TM4SF4P48230 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF4P48230 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.72■□□□□ 0.43
TM4SF4P48230 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF4P48230 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF4P48230 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TM4SF4P48230 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TM4SF4P48230 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF4P48230 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
TM4SF4P48230 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF4P48230 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.72■□□□□ 0.43
TM4SF4P48230 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TM4SF4P48230 AC078925.2-201ENST00000624013 1973 ntBASIC17.71■□□□□ 0.43
TM4SF4P48230 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TM4SF4P48230 AC007787.1-201ENST00000588095 1583 ntBASIC17.71■□□□□ 0.43
TM4SF4P48230 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF4P48230 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF4P48230 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF4P48230 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF4P48230 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF4P48230 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF4P48230 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TM4SF4P48230 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF4P48230 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TM4SF4P48230 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.71■□□□□ 0.43
TM4SF4P48230 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF4P48230 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.71■□□□□ 0.43
TM4SF4P48230 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF4P48230 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.71■□□□□ 0.43
TM4SF4P48230 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TM4SF4P48230 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF4P48230 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF4P48230 AP001065.2-201ENST00000617205 644 ntBASIC17.71■□□□□ 0.43
TM4SF4P48230 AL136295.7-201ENST00000619226 1200 ntBASIC17.71■□□□□ 0.43
TM4SF4P48230 AL805961.1-201ENST00000642026 753 ntBASIC17.71■□□□□ 0.43
TM4SF4P48230 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.71■□□□□ 0.43
TM4SF4P48230 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF4P48230 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF4P48230 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.71■□□□□ 0.43
TM4SF4P48230 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF4P48230 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TM4SF4P48230 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF4P48230 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF4P48230 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF4P48230 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TM4SF4P48230 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF4P48230 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.71■□□□□ 0.42
TM4SF4P48230 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF4P48230 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF4P48230 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF4P48230 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TM4SF4P48230 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF4P48230 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.7■□□□□ 0.42
TM4SF4P48230 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TM4SF4P48230 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF4P48230 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF4P48230 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF4P48230 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.7■□□□□ 0.42
TM4SF4P48230 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TM4SF4P48230 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.7■□□□□ 0.42
TM4SF4P48230 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.7■□□□□ 0.42
TM4SF4P48230 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.7■□□□□ 0.42
TM4SF4P48230 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF4P48230 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF4P48230 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF4P48230 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF4P48230 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.7■□□□□ 0.42
TM4SF4P48230 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.7■□□□□ 0.42
TM4SF4P48230 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.7■□□□□ 0.42
TM4SF4P48230 AC132192.2-201ENST00000596206 1147 ntBASIC17.7■□□□□ 0.42
TM4SF4P48230 AC090164.2-201ENST00000611487 516 ntBASIC17.7■□□□□ 0.42
TM4SF4P48230 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.7■□□□□ 0.42
TM4SF4P48230 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms