Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC107373.2-201ENST00000607735 490 ntBASIC14.32□□□□□ -0.12
ATRXP46100 AC006453.4-201ENST00000636949 1252 ntBASIC14.32□□□□□ -0.12
ATRXP46100 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ATRXP46100 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.32□□□□□ -0.12
ATRXP46100 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 AC134043.2-201ENST00000624206 2238 ntBASIC14.32□□□□□ -0.12
ATRXP46100 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ATRXP46100 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ATRXP46100 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ATRXP46100 AC139713.2-201ENST00000641328 2723 ntBASIC14.32□□□□□ -0.12
ATRXP46100 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.32□□□□□ -0.12
ATRXP46100 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ATRXP46100 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ATRXP46100 AL138688.1-201ENST00000624851 1594 ntBASIC14.32□□□□□ -0.12
ATRXP46100 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ATRXP46100 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC14.32□□□□□ -0.12
ATRXP46100 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 MIR4649-201ENST00000582839 64 ntBASIC14.32□□□□□ -0.12
ATRXP46100 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.32□□□□□ -0.12
ATRXP46100 AL645728.2-202ENST00000641679 227 ntBASIC14.32□□□□□ -0.12
ATRXP46100 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.32□□□□□ -0.12
ATRXP46100 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.31□□□□□ -0.12
ATRXP46100 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ATRXP46100 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ATRXP46100 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ATRXP46100 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
ATRXP46100 HCG27-204ENST00000424675 895 ntTSL 3 BASIC14.31□□□□□ -0.12
ATRXP46100 AC124947.2-201ENST00000547118 1133 ntBASIC14.31□□□□□ -0.12
ATRXP46100 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC14.31□□□□□ -0.12
ATRXP46100 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.31□□□□□ -0.12
ATRXP46100 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.31□□□□□ -0.12
ATRXP46100 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ATRXP46100 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ATRXP46100 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
ATRXP46100 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.31□□□□□ -0.12
ATRXP46100 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
ATRXP46100 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
ATRXP46100 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.31□□□□□ -0.12
ATRXP46100 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.31□□□□□ -0.12
ATRXP46100 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ATRXP46100 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.31□□□□□ -0.12
ATRXP46100 AC079178.1-201ENST00000420915 656 ntBASIC14.31□□□□□ -0.12
ATRXP46100 IGKV1OR-2-201ENST00000457995 350 ntBASIC14.31□□□□□ -0.12
ATRXP46100 ALG1L6P-201ENST00000515248 758 ntBASIC14.31□□□□□ -0.12
ATRXP46100 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.31□□□□□ -0.12
ATRXP46100 AC093813.1-201ENST00000605066 256 ntBASIC14.31□□□□□ -0.12
ATRXP46100 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ATRXP46100 MIR6125-201ENST00000618986 96 ntBASIC14.31□□□□□ -0.12
ATRXP46100 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
ATRXP46100 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATRXP46100 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ATRXP46100 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ATRXP46100 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ATRXP46100 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 AL161772.1-201ENST00000610494 4412 ntBASIC14.3□□□□□ -0.12
ATRXP46100 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
ATRXP46100 UBALD1-205ENST00000590891 2641 ntBASIC14.3□□□□□ -0.12
ATRXP46100 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.3□□□□□ -0.12
ATRXP46100 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ATRXP46100 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.3□□□□□ -0.12
ATRXP46100 AC074138.1-201ENST00000611182 1303 ntBASIC14.3□□□□□ -0.12
ATRXP46100 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms