Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC1A1P43005 AC097359.3-201ENST00000603982 1210 ntBASIC16.63■□□□□ 0.25
SLC1A1P43005 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 AC126365.1-201ENST00000578585 1514 ntBASIC16.63■□□□□ 0.25
SLC1A1P43005 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC1A1P43005 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SLC1A1P43005 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 KRT8P44-201ENST00000441609 1350 ntBASIC16.63■□□□□ 0.25
SLC1A1P43005 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC1A1P43005 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 TNRC18P2-201ENST00000417666 2714 ntBASIC16.62■□□□□ 0.25
SLC1A1P43005 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SLC1A1P43005 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLC1A1P43005 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC1A1P43005 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 AC136604.1-201ENST00000418535 575 ntBASIC16.62■□□□□ 0.25
SLC1A1P43005 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
SLC1A1P43005 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.62■□□□□ 0.25
SLC1A1P43005 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SLC1A1P43005 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SLC1A1P43005 POLD2P1-201ENST00000511220 997 ntBASIC16.62■□□□□ 0.25
SLC1A1P43005 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC1A1P43005 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC1A1P43005 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC1A1P43005 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC1A1P43005 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 AC105339.1-204ENST00000636249 355 ntBASIC16.62■□□□□ 0.25
SLC1A1P43005 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SLC1A1P43005 ELL2P1-201ENST00000413990 1906 ntBASIC16.62■□□□□ 0.25
SLC1A1P43005 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLC1A1P43005 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
SLC1A1P43005 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 AC068587.6-202ENST00000641839 5619 ntBASIC16.62■□□□□ 0.25
SLC1A1P43005 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLC1A1P43005 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLC1A1P43005 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLC1A1P43005 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLC1A1P43005 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A1P43005 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC1A1P43005 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SLC1A1P43005 AC067930.6-201ENST00000623257 4947 ntBASIC16.61■□□□□ 0.25
SLC1A1P43005 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC1A1P43005 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC1A1P43005 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
SLC1A1P43005 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SLC1A1P43005 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC1A1P43005 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLC1A1P43005 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 AL353705.2-201ENST00000428243 662 ntBASIC16.61■□□□□ 0.25
SLC1A1P43005 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC1A1P43005 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC1A1P43005 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC1A1P43005 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.61■□□□□ 0.25
SLC1A1P43005 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC1A1P43005 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SLC1A1P43005 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC1A1P43005 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC1A1P43005 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC1A1P43005 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC1A1P43005 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SLC1A1P43005 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLC1A1P43005 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A1P43005 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC1A1P43005 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC1A1P43005 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms