Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HADHAP40939 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.12■□□□□ 0.17
HADHAP40939 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HADHAP40939 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HADHAP40939 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HADHAP40939 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
HADHAP40939 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HADHAP40939 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.11■□□□□ 0.17
HADHAP40939 AL691432.1-201ENST00000596308 1422 ntBASIC16.11■□□□□ 0.17
HADHAP40939 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HADHAP40939 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HADHAP40939 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HADHAP40939 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.11■□□□□ 0.17
HADHAP40939 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HADHAP40939 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.11■□□□□ 0.17
HADHAP40939 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HADHAP40939 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HADHAP40939 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.11■□□□□ 0.17
HADHAP40939 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.11■□□□□ 0.17
HADHAP40939 GPS2P2-201ENST00000430745 888 ntBASIC16.11■□□□□ 0.17
HADHAP40939 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.11■□□□□ 0.17
HADHAP40939 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.11■□□□□ 0.17
HADHAP40939 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.11■□□□□ 0.17
HADHAP40939 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.11■□□□□ 0.17
HADHAP40939 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.11■□□□□ 0.17
HADHAP40939 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HADHAP40939 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HADHAP40939 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
HADHAP40939 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HADHAP40939 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HADHAP40939 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.11■□□□□ 0.17
HADHAP40939 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HADHAP40939 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.11■□□□□ 0.17
HADHAP40939 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.11■□□□□ 0.17
HADHAP40939 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
HADHAP40939 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HADHAP40939 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HADHAP40939 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.1■□□□□ 0.17
HADHAP40939 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.1■□□□□ 0.17
HADHAP40939 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
HADHAP40939 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.1■□□□□ 0.17
HADHAP40939 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HADHAP40939 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HADHAP40939 AC073347.1-201ENST00000421633 2643 ntBASIC16.1■□□□□ 0.17
HADHAP40939 AP003680.1-201ENST00000598970 3660 ntBASIC16.1■□□□□ 0.17
HADHAP40939 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HADHAP40939 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HADHAP40939 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HADHAP40939 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HADHAP40939 AC004987.2-201ENST00000395959 1148 ntBASIC16.1■□□□□ 0.17
HADHAP40939 SPDYE7P-202ENST00000420373 878 ntBASIC16.1■□□□□ 0.17
HADHAP40939 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.1■□□□□ 0.17
HADHAP40939 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.1■□□□□ 0.17
HADHAP40939 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.1■□□□□ 0.17
HADHAP40939 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.1■□□□□ 0.17
HADHAP40939 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.1■□□□□ 0.17
HADHAP40939 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.1■□□□□ 0.17
HADHAP40939 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.1■□□□□ 0.17
HADHAP40939 AL596442.2-201ENST00000610240 980 ntBASIC16.1■□□□□ 0.17
HADHAP40939 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HADHAP40939 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.1■□□□□ 0.17
HADHAP40939 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.1■□□□□ 0.17
HADHAP40939 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
HADHAP40939 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HADHAP40939 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HADHAP40939 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HADHAP40939 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.1■□□□□ 0.17
HADHAP40939 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HADHAP40939 SSR4P1-203ENST00000599569 2260 ntBASIC16.1■□□□□ 0.17
HADHAP40939 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.1■□□□□ 0.17
HADHAP40939 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.09■□□□□ 0.17
HADHAP40939 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.09■□□□□ 0.17
HADHAP40939 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.09■□□□□ 0.17
HADHAP40939 AL365209.1-201ENST00000624418 6473 ntBASIC16.09■□□□□ 0.17
HADHAP40939 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
HADHAP40939 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms