Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFC5P40937 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RFC5P40937 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFC5P40937 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RFC5P40937 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.48■□□□□ 0.39
RFC5P40937 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC5P40937 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFC5P40937 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC5P40937 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.48■□□□□ 0.39
RFC5P40937 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.48■□□□□ 0.39
RFC5P40937 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.48■□□□□ 0.39
RFC5P40937 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFC5P40937 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.48■□□□□ 0.39
RFC5P40937 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.48■□□□□ 0.39
RFC5P40937 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.48■□□□□ 0.39
RFC5P40937 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFC5P40937 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RFC5P40937 AC092850.2-201ENST00000623821 2697 ntBASIC17.48■□□□□ 0.39
RFC5P40937 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC5P40937 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC5P40937 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.48■□□□□ 0.39
RFC5P40937 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC5P40937 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RFC5P40937 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC5P40937 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC5P40937 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RFC5P40937 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RFC5P40937 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC5P40937 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC5P40937 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC5P40937 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.47■□□□□ 0.39
RFC5P40937 AC098614.1-201ENST00000368528 745 ntBASIC17.47■□□□□ 0.39
RFC5P40937 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC5P40937 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.47■□□□□ 0.39
RFC5P40937 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.47■□□□□ 0.39
RFC5P40937 DGCR5-201ENST00000399539 862 ntBASIC17.47■□□□□ 0.39
RFC5P40937 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
RFC5P40937 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.47■□□□□ 0.39
RFC5P40937 MYCLP2-201ENST00000449268 967 ntBASIC17.47■□□□□ 0.39
RFC5P40937 RN7SL399P-201ENST00000471648 279 ntBASIC17.47■□□□□ 0.39
RFC5P40937 AC104596.2-201ENST00000512793 793 ntBASIC17.47■□□□□ 0.39
RFC5P40937 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.47■□□□□ 0.39
RFC5P40937 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.47■□□□□ 0.39
RFC5P40937 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RFC5P40937 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.47■□□□□ 0.39
RFC5P40937 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC5P40937 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RFC5P40937 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC5P40937 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RFC5P40937 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.47■□□□□ 0.39
RFC5P40937 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC5P40937 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC5P40937 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RFC5P40937 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC5P40937 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC5P40937 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC5P40937 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RFC5P40937 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC5P40937 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC5P40937 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC5P40937 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
RFC5P40937 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.46■□□□□ 0.39
RFC5P40937 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.46■□□□□ 0.39
RFC5P40937 LINC02199-201ENST00000506655 2702 ntBASIC17.46■□□□□ 0.39
RFC5P40937 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.46■□□□□ 0.39
RFC5P40937 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RFC5P40937 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RFC5P40937 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RFC5P40937 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.46■□□□□ 0.39
RFC5P40937 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.46■□□□□ 0.39
RFC5P40937 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
RFC5P40937 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.46■□□□□ 0.39
RFC5P40937 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.46■□□□□ 0.39
RFC5P40937 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.46■□□□□ 0.39
RFC5P40937 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.46■□□□□ 0.39
RFC5P40937 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.46■□□□□ 0.39
RFC5P40937 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.46■□□□□ 0.39
RFC5P40937 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RFC5P40937 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.46■□□□□ 0.39
RFC5P40937 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.46■□□□□ 0.39
RFC5P40937 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.46■□□□□ 0.39
RFC5P40937 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
RFC5P40937 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC5P40937 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
RFC5P40937 HYMAI-201ENST00000635591 3347 ntBASIC17.46■□□□□ 0.38
RFC5P40937 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms