Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
GRIK1P39086 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.72■□□□□ 0.27
GRIK1P39086 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.72■□□□□ 0.27
GRIK1P39086 AC239800.4-201ENST00000603712 296 ntBASIC16.72■□□□□ 0.27
GRIK1P39086 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GRIK1P39086 AC007431.3-201ENST00000623221 587 ntBASIC16.72■□□□□ 0.27
GRIK1P39086 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.72■□□□□ 0.27
GRIK1P39086 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
GRIK1P39086 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.72■□□□□ 0.27
GRIK1P39086 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.72■□□□□ 0.27
GRIK1P39086 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GRIK1P39086 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.72■□□□□ 0.27
GRIK1P39086 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GRIK1P39086 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.71■□□□□ 0.27
GRIK1P39086 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIK1P39086 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIK1P39086 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.71■□□□□ 0.27
GRIK1P39086 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.71■□□□□ 0.27
GRIK1P39086 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GRIK1P39086 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIK1P39086 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
GRIK1P39086 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GRIK1P39086 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.71■□□□□ 0.27
GRIK1P39086 CDC14C-201ENST00000428251 1719 ntBASIC16.71■□□□□ 0.27
GRIK1P39086 AC069224.1-201ENST00000566372 1715 ntBASIC16.71■□□□□ 0.27
GRIK1P39086 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIK1P39086 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
GRIK1P39086 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GRIK1P39086 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIK1P39086 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIK1P39086 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
GRIK1P39086 AC136604.1-201ENST00000418535 575 ntBASIC16.71■□□□□ 0.27
GRIK1P39086 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIK1P39086 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIK1P39086 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.71■□□□□ 0.27
GRIK1P39086 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIK1P39086 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.71■□□□□ 0.27
GRIK1P39086 RARRES2P5-201ENST00000564013 466 ntBASIC16.71■□□□□ 0.27
GRIK1P39086 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.71■□□□□ 0.27
GRIK1P39086 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
GRIK1P39086 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.71■□□□□ 0.27
GRIK1P39086 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIK1P39086 AL035252.4-201ENST00000624174 288 ntBASIC16.71■□□□□ 0.27
GRIK1P39086 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.71■□□□□ 0.27
GRIK1P39086 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.71■□□□□ 0.27
GRIK1P39086 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
GRIK1P39086 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GRIK1P39086 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIK1P39086 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIK1P39086 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIK1P39086 AP003680.1-201ENST00000598970 3660 ntBASIC16.71■□□□□ 0.27
GRIK1P39086 AL607033.1-201ENST00000623900 1599 ntBASIC16.71■□□□□ 0.27
GRIK1P39086 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIK1P39086 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GRIK1P39086 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
GRIK1P39086 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIK1P39086 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIK1P39086 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.7■□□□□ 0.26
GRIK1P39086 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIK1P39086 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIK1P39086 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIK1P39086 LINC02447-202ENST00000501888 2146 ntBASIC16.7■□□□□ 0.26
GRIK1P39086 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
GRIK1P39086 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 AC018695.7-201ENST00000624587 2492 ntBASIC16.7■□□□□ 0.26
GRIK1P39086 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIK1P39086 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.7■□□□□ 0.26
GRIK1P39086 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.7■□□□□ 0.26
GRIK1P39086 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GRIK1P39086 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIK1P39086 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
GRIK1P39086 DGCR5-201ENST00000399539 862 ntBASIC16.7■□□□□ 0.26
GRIK1P39086 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
GRIK1P39086 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIK1P39086 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.7■□□□□ 0.26
GRIK1P39086 MYCLP2-201ENST00000449268 967 ntBASIC16.7■□□□□ 0.26
GRIK1P39086 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIK1P39086 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.7■□□□□ 0.26
GRIK1P39086 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.7■□□□□ 0.26
GRIK1P39086 AC123567.1-201ENST00000548294 1261 ntBASIC16.7■□□□□ 0.26
GRIK1P39086 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms