Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.35■□□□□ 0.69
PDE6BP35913 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDE6BP35913 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDE6BP35913 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PDE6BP35913 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDE6BP35913 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDE6BP35913 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.35■□□□□ 0.69
PDE6BP35913 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.35■□□□□ 0.69
PDE6BP35913 NUS1P3-201ENST00000423502 862 ntBASIC19.35■□□□□ 0.69
PDE6BP35913 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.35■□□□□ 0.69
PDE6BP35913 EIF4HP1-201ENST00000453115 687 ntBASIC19.35■□□□□ 0.69
PDE6BP35913 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.35■□□□□ 0.69
PDE6BP35913 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PDE6BP35913 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PDE6BP35913 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.35■□□□□ 0.69
PDE6BP35913 RN7SL48P-201ENST00000579283 293 ntBASIC19.35■□□□□ 0.69
PDE6BP35913 MIR3619-201ENST00000579667 83 ntBASIC19.35■□□□□ 0.69
PDE6BP35913 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDE6BP35913 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.35■□□□□ 0.69
PDE6BP35913 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDE6BP35913 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PDE6BP35913 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDE6BP35913 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.35■□□□□ 0.69
PDE6BP35913 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDE6BP35913 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDE6BP35913 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDE6BP35913 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6BP35913 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.34■□□□□ 0.69
PDE6BP35913 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PDE6BP35913 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PDE6BP35913 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6BP35913 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6BP35913 AC099398.1-201ENST00000567919 2776 ntBASIC19.34■□□□□ 0.69
PDE6BP35913 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6BP35913 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PDE6BP35913 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6BP35913 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.34■□□□□ 0.69
PDE6BP35913 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6BP35913 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.34■□□□□ 0.69
PDE6BP35913 AC114812.1-204ENST00000449669 728 ntBASIC19.34■□□□□ 0.69
PDE6BP35913 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PDE6BP35913 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6BP35913 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC19.34■□□□□ 0.69
PDE6BP35913 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PDE6BP35913 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.34■□□□□ 0.69
PDE6BP35913 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6BP35913 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6BP35913 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6BP35913 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6BP35913 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6BP35913 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
PDE6BP35913 AL354989.2-201ENST00000435838 1540 ntBASIC19.34■□□□□ 0.69
PDE6BP35913 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.34■□□□□ 0.69
PDE6BP35913 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
PDE6BP35913 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6BP35913 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.34■□□□□ 0.69
PDE6BP35913 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6BP35913 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6BP35913 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
PDE6BP35913 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6BP35913 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6BP35913 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6BP35913 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6BP35913 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PDE6BP35913 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6BP35913 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6BP35913 AL645608.8-201ENST00000606034 2086 ntBASIC19.33■□□□□ 0.69
PDE6BP35913 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.33■□□□□ 0.69
PDE6BP35913 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6BP35913 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6BP35913 TPM3P8-201ENST00000330554 643 ntBASIC19.33■□□□□ 0.68
PDE6BP35913 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6BP35913 CNN2P10-201ENST00000443067 918 ntBASIC19.33■□□□□ 0.68
PDE6BP35913 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.33■□□□□ 0.68
PDE6BP35913 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.33■□□□□ 0.68
PDE6BP35913 AC126915.1-201ENST00000522847 1038 ntBASIC19.33■□□□□ 0.68
PDE6BP35913 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.33■□□□□ 0.68
PDE6BP35913 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.33■□□□□ 0.68
PDE6BP35913 ECM1P1-201ENST00000604092 1279 ntBASIC19.33■□□□□ 0.68
PDE6BP35913 AC018735.1-201ENST00000437208 1502 ntBASIC19.33■□□□□ 0.68
PDE6BP35913 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6BP35913 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6BP35913 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6BP35913 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6BP35913 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6BP35913 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PDE6BP35913 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.33■□□□□ 0.68
PDE6BP35913 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6BP35913 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6BP35913 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6BP35913 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.33■□□□□ 0.68
PDE6BP35913 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.33■□□□□ 0.68
PDE6BP35913 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6BP35913 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.33■□□□□ 0.68
PDE6BP35913 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.33■□□□□ 0.68
PDE6BP35913 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.33■□□□□ 0.68
PDE6BP35913 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PDE6BP35913 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms