Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RFC4P35249 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFC4P35249 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.73■□□□□ 0.75
RFC4P35249 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.73■□□□□ 0.75
RFC4P35249 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.73■□□□□ 0.75
RFC4P35249 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.73■□□□□ 0.75
RFC4P35249 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.73■□□□□ 0.75
RFC4P35249 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.73■□□□□ 0.75
RFC4P35249 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
RFC4P35249 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.73■□□□□ 0.75
RFC4P35249 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RFC4P35249 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC4P35249 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RFC4P35249 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC4P35249 AL354989.2-201ENST00000435838 1540 ntBASIC19.72■□□□□ 0.75
RFC4P35249 AC018735.1-201ENST00000437208 1502 ntBASIC19.72■□□□□ 0.75
RFC4P35249 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.72■□□□□ 0.75
RFC4P35249 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC4P35249 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC4P35249 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC4P35249 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RFC4P35249 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC4P35249 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.72■□□□□ 0.75
RFC4P35249 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.72■□□□□ 0.75
RFC4P35249 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.72■□□□□ 0.75
RFC4P35249 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.72■□□□□ 0.75
RFC4P35249 NUS1P3-201ENST00000423502 862 ntBASIC19.72■□□□□ 0.75
RFC4P35249 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.72■□□□□ 0.75
RFC4P35249 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.72■□□□□ 0.75
RFC4P35249 ECM1P1-201ENST00000604092 1279 ntBASIC19.72■□□□□ 0.75
RFC4P35249 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC4P35249 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFC4P35249 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RFC4P35249 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.72■□□□□ 0.75
RFC4P35249 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.72■□□□□ 0.75
RFC4P35249 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
RFC4P35249 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.71■□□□□ 0.75
RFC4P35249 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RFC4P35249 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFC4P35249 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
RFC4P35249 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC4P35249 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC4P35249 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC4P35249 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
RFC4P35249 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.71■□□□□ 0.75
RFC4P35249 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC4P35249 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.71■□□□□ 0.75
RFC4P35249 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.71■□□□□ 0.75
RFC4P35249 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.71■□□□□ 0.75
RFC4P35249 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
RFC4P35249 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFC4P35249 AL451050.2-201ENST00000606967 682 ntBASIC19.71■□□□□ 0.75
RFC4P35249 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC4P35249 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.71■□□□□ 0.75
RFC4P35249 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RFC4P35249 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC4P35249 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RFC4P35249 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.71■□□□□ 0.75
RFC4P35249 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC4P35249 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC4P35249 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC4P35249 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.71■□□□□ 0.75
RFC4P35249 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RFC4P35249 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC4P35249 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RFC4P35249 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
RFC4P35249 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.7■□□□□ 0.74
RFC4P35249 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RFC4P35249 TPM3P8-201ENST00000330554 643 ntBASIC19.7■□□□□ 0.74
RFC4P35249 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFC4P35249 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
RFC4P35249 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.7■□□□□ 0.74
RFC4P35249 POM121L10P-201ENST00000436994 1285 ntBASIC19.7■□□□□ 0.74
RFC4P35249 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.7■□□□□ 0.74
RFC4P35249 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC4P35249 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RFC4P35249 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.7■□□□□ 0.74
RFC4P35249 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.7■□□□□ 0.74
RFC4P35249 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.7■□□□□ 0.74
RFC4P35249 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC4P35249 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC4P35249 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC4P35249 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC4P35249 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC4P35249 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC4P35249 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms