Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A4P31645 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC6A4P31645 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC6A4P31645 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC6A4P31645 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A4P31645 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A4P31645 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A4P31645 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
SLC6A4P31645 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A4P31645 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC6A4P31645 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A4P31645 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC6A4P31645 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A4P31645 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
SLC6A4P31645 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A4P31645 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
SLC6A4P31645 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC6A4P31645 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC6A4P31645 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A4P31645 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC6A4P31645 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC6A4P31645 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A4P31645 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC6A4P31645 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC6A4P31645 COX5BP8-201ENST00000416911 349 ntBASIC16.22■□□□□ 0.19
SLC6A4P31645 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC6A4P31645 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC6A4P31645 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC6A4P31645 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.22■□□□□ 0.19
SLC6A4P31645 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC6A4P31645 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC6A4P31645 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC6A4P31645 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A4P31645 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
SLC6A4P31645 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A4P31645 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC6A4P31645 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A4P31645 AC138969.3-201ENST00000546612 1459 ntBASIC16.22■□□□□ 0.19
SLC6A4P31645 AC138932.2-201ENST00000548268 1459 ntBASIC16.22■□□□□ 0.19
SLC6A4P31645 AC126755.4-201ENST00000549796 1459 ntBASIC16.22■□□□□ 0.19
SLC6A4P31645 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A4P31645 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC6A4P31645 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A4P31645 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC6A4P31645 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLC6A4P31645 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A4P31645 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A4P31645 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SLC6A4P31645 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A4P31645 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A4P31645 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A4P31645 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A4P31645 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC6A4P31645 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A4P31645 AC005034.1-201ENST00000426657 489 ntBASIC16.21■□□□□ 0.19
SLC6A4P31645 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A4P31645 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC6A4P31645 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC6A4P31645 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A4P31645 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A4P31645 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.21■□□□□ 0.19
SLC6A4P31645 AL035252.4-201ENST00000624174 288 ntBASIC16.21■□□□□ 0.19
SLC6A4P31645 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A4P31645 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A4P31645 AL365203.3-201ENST00000609742 2057 ntBASIC16.21■□□□□ 0.19
SLC6A4P31645 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A4P31645 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SLC6A4P31645 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A4P31645 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A4P31645 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A4P31645 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A4P31645 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A4P31645 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A4P31645 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A4P31645 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SLC6A4P31645 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A4P31645 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC6A4P31645 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC6A4P31645 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC6A4P31645 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SLC6A4P31645 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.21■□□□□ 0.18
SLC6A4P31645 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC6A4P31645 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC6A4P31645 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC6A4P31645 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
SLC6A4P31645 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
SLC6A4P31645 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC6A4P31645 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 AL121723.1-201ENST00000445194 1519 ntBASIC16.2■□□□□ 0.18
SLC6A4P31645 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC6A4P31645 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms