Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CASQ1P31415 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASQ1P31415 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASQ1P31415 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASQ1P31415 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC17.13■□□□□ 0.33
CASQ1P31415 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.13■□□□□ 0.33
CASQ1P31415 WASH6P-202ENST00000359512 1437 ntBASIC17.13■□□□□ 0.33
CASQ1P31415 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ1P31415 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ1P31415 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 AC005840.4-201ENST00000541242 2494 ntBASIC17.12■□□□□ 0.33
CASQ1P31415 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.12■□□□□ 0.33
CASQ1P31415 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ1P31415 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ1P31415 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.12■□□□□ 0.33
CASQ1P31415 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.12■□□□□ 0.33
CASQ1P31415 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ1P31415 AC093724.1-201ENST00000448659 1027 ntBASIC17.12■□□□□ 0.33
CASQ1P31415 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.12■□□□□ 0.33
CASQ1P31415 AC106795.1-205ENST00000512851 1056 ntBASIC17.12■□□□□ 0.33
CASQ1P31415 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CASQ1P31415 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.12■□□□□ 0.33
CASQ1P31415 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ1P31415 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CASQ1P31415 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ1P31415 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ1P31415 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.12■□□□□ 0.33
CASQ1P31415 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.12■□□□□ 0.33
CASQ1P31415 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CASQ1P31415 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.12■□□□□ 0.33
CASQ1P31415 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CASQ1P31415 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CASQ1P31415 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CASQ1P31415 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ1P31415 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 AC006504.4-201ENST00000592118 1568 ntBASIC17.11■□□□□ 0.33
CASQ1P31415 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.11■□□□□ 0.33
CASQ1P31415 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CASQ1P31415 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CASQ1P31415 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CASQ1P31415 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CASQ1P31415 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
CASQ1P31415 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.11■□□□□ 0.33
CASQ1P31415 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CASQ1P31415 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.11■□□□□ 0.33
CASQ1P31415 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CASQ1P31415 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CASQ1P31415 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.11■□□□□ 0.33
CASQ1P31415 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.11■□□□□ 0.33
CASQ1P31415 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.11■□□□□ 0.33
CASQ1P31415 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CASQ1P31415 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.11■□□□□ 0.33
CASQ1P31415 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CASQ1P31415 GGTLC5P-201ENST00000617623 998 ntBASIC17.11■□□□□ 0.33
CASQ1P31415 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CASQ1P31415 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CASQ1P31415 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 AC117489.1-201ENST00000625169 3217 ntBASIC17.11■□□□□ 0.33
CASQ1P31415 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ1P31415 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.11■□□□□ 0.33
CASQ1P31415 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.11■□□□□ 0.33
CASQ1P31415 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.11■□□□□ 0.33
CASQ1P31415 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.11■□□□□ 0.33
CASQ1P31415 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CASQ1P31415 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.1■□□□□ 0.33
CASQ1P31415 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ1P31415 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ1P31415 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms