Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXC12P31275 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HOXC12P31275 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HOXC12P31275 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HOXC12P31275 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HOXC12P31275 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXC12P31275 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HOXC12P31275 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
HOXC12P31275 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
HOXC12P31275 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HOXC12P31275 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HOXC12P31275 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.13□□□□□ -0.15
HOXC12P31275 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HOXC12P31275 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.13□□□□□ -0.15
HOXC12P31275 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HOXC12P31275 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HOXC12P31275 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HOXC12P31275 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.13□□□□□ -0.15
HOXC12P31275 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 HAUS4P1-201ENST00000406739 1145 ntBASIC14.13□□□□□ -0.15
HOXC12P31275 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.13□□□□□ -0.15
HOXC12P31275 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.13□□□□□ -0.15
HOXC12P31275 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.13□□□□□ -0.15
HOXC12P31275 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.13□□□□□ -0.15
HOXC12P31275 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.13□□□□□ -0.15
HOXC12P31275 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.13□□□□□ -0.15
HOXC12P31275 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HOXC12P31275 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
HOXC12P31275 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.13□□□□□ -0.15
HOXC12P31275 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
HOXC12P31275 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
HOXC12P31275 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HOXC12P31275 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.13□□□□□ -0.15
HOXC12P31275 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HOXC12P31275 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.13□□□□□ -0.15
HOXC12P31275 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.13□□□□□ -0.15
HOXC12P31275 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HOXC12P31275 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HOXC12P31275 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.12□□□□□ -0.15
HOXC12P31275 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HOXC12P31275 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.12□□□□□ -0.15
HOXC12P31275 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.12□□□□□ -0.15
HOXC12P31275 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.12□□□□□ -0.15
HOXC12P31275 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.12□□□□□ -0.15
HOXC12P31275 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HOXC12P31275 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.12□□□□□ -0.15
HOXC12P31275 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.12□□□□□ -0.15
HOXC12P31275 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.12□□□□□ -0.15
HOXC12P31275 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.12□□□□□ -0.15
HOXC12P31275 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.12□□□□□ -0.15
HOXC12P31275 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.12□□□□□ -0.15
HOXC12P31275 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.12□□□□□ -0.15
HOXC12P31275 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HOXC12P31275 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms