Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.1■□□□□ 0.01
PTPN6P29350 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PTPN6P29350 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.1■□□□□ 0.01
PTPN6P29350 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.1■□□□□ 0.01
PTPN6P29350 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.1■□□□□ 0.01
PTPN6P29350 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
PTPN6P29350 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.1■□□□□ 0.01
PTPN6P29350 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.1■□□□□ 0.01
PTPN6P29350 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN6P29350 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN6P29350 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN6P29350 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN6P29350 REXO1L1P-202ENST00000608646 1974 ntBASIC15.09■□□□□ 0.01
PTPN6P29350 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN6P29350 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN6P29350 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
PTPN6P29350 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.09■□□□□ 0.01
PTPN6P29350 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN6P29350 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 SPCS2P4-201ENST00000436160 681 ntBASIC15.09■□□□□ 0.01
PTPN6P29350 AL592309.1-201ENST00000443127 649 ntBASIC15.09■□□□□ 0.01
PTPN6P29350 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN6P29350 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.09■□□□□ 0.01
PTPN6P29350 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.09■□□□□ 0.01
PTPN6P29350 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.09■□□□□ 0.01
PTPN6P29350 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.09■□□□□ 0.01
PTPN6P29350 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.09■□□□□ 0.01
PTPN6P29350 SPTSSB-204ENST00000617024 1292 ntBASIC15.09■□□□□ 0.01
PTPN6P29350 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PTPN6P29350 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN6P29350 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PTPN6P29350 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
PTPN6P29350 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN6P29350 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PTPN6P29350 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN6P29350 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PTPN6P29350 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
PTPN6P29350 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.08■□□□□ 0.01
PTPN6P29350 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PTPN6P29350 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PTPN6P29350 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.08■□□□□ 0.01
PTPN6P29350 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PTPN6P29350 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.08■□□□□ 0.01
PTPN6P29350 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PTPN6P29350 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTPN6P29350 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
PTPN6P29350 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.08■□□□□ 0
PTPN6P29350 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTPN6P29350 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN6P29350 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN6P29350 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN6P29350 AL627223.1-201ENST00000416693 442 ntBASIC15.08■□□□□ 0
PTPN6P29350 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.08■□□□□ 0
PTPN6P29350 AC105233.2-201ENST00000523697 349 ntBASIC15.08■□□□□ 0
PTPN6P29350 AF228730.5-201ENST00000530288 346 ntBASIC15.08■□□□□ 0
PTPN6P29350 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.08■□□□□ 0
PTPN6P29350 AC243562.2-201ENST00000561247 970 ntBASIC15.08■□□□□ 0
PTPN6P29350 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.08■□□□□ 0
PTPN6P29350 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.08■□□□□ 0
PTPN6P29350 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.08■□□□□ 0
PTPN6P29350 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0
PTPN6P29350 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.08■□□□□ 0
PTPN6P29350 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.08■□□□□ 0
PTPN6P29350 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN6P29350 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.08■□□□□ 0
PTPN6P29350 TCAF2P1-201ENST00000291129 2421 ntBASIC15.08■□□□□ 0
PTPN6P29350 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.08■□□□□ 0
PTPN6P29350 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.08■□□□□ 0
PTPN6P29350 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.08■□□□□ 0
PTPN6P29350 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN6P29350 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN6P29350 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTPN6P29350 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.08■□□□□ 0
PTPN6P29350 CICP24-201ENST00000605464 2705 ntBASIC15.08■□□□□ 0
PTPN6P29350 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.08■□□□□ 0
PTPN6P29350 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.08■□□□□ 0
PTPN6P29350 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTPN6P29350 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN6P29350 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN6P29350 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.07■□□□□ 0
PTPN6P29350 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms