Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.23■□□□□ 0.03
LAMA1P25391 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LAMA1P25391 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
LAMA1P25391 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LAMA1P25391 GAPDHP40-201ENST00000505218 1006 ntBASIC15.23■□□□□ 0.03
LAMA1P25391 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
LAMA1P25391 AC243562.2-201ENST00000561247 970 ntBASIC15.23■□□□□ 0.03
LAMA1P25391 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LAMA1P25391 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.23■□□□□ 0.03
LAMA1P25391 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.23■□□□□ 0.03
LAMA1P25391 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LAMA1P25391 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.23■□□□□ 0.03
LAMA1P25391 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 LINC01144-201ENST00000626198 1710 ntBASIC15.22■□□□□ 0.03
LAMA1P25391 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.22■□□□□ 0.03
LAMA1P25391 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.22■□□□□ 0.03
LAMA1P25391 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LAMA1P25391 AC079336.7-201ENST00000623428 1078 ntBASIC15.22■□□□□ 0.03
LAMA1P25391 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.22■□□□□ 0.03
LAMA1P25391 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.22■□□□□ 0.03
LAMA1P25391 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LAMA1P25391 CYP46A4P-201ENST00000414953 267 ntBASIC15.22■□□□□ 0.03
LAMA1P25391 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.22■□□□□ 0.03
LAMA1P25391 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.22■□□□□ 0.03
LAMA1P25391 AC245884.6-201ENST00000515672 1067 ntBASIC15.22■□□□□ 0.03
LAMA1P25391 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LAMA1P25391 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LAMA1P25391 MIR3907-201ENST00000579424 151 ntBASIC15.22■□□□□ 0.03
LAMA1P25391 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LAMA1P25391 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMA1P25391 AC026471.1-201ENST00000564629 3026 ntBASIC15.21■□□□□ 0.03
LAMA1P25391 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.21■□□□□ 0.03
LAMA1P25391 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LAMA1P25391 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.21■□□□□ 0.03
LAMA1P25391 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.21■□□□□ 0.03
LAMA1P25391 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.21■□□□□ 0.03
LAMA1P25391 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.21■□□□□ 0.03
LAMA1P25391 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.21■□□□□ 0.03
LAMA1P25391 AC022217.1-201ENST00000521069 738 ntBASIC15.21■□□□□ 0.03
LAMA1P25391 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.21■□□□□ 0.03
LAMA1P25391 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.21■□□□□ 0.03
LAMA1P25391 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.21■□□□□ 0.03
LAMA1P25391 AL133499.1-201ENST00000596207 608 ntBASIC15.21■□□□□ 0.03
LAMA1P25391 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.21■□□□□ 0.03
LAMA1P25391 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.21■□□□□ 0.03
LAMA1P25391 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.21■□□□□ 0.03
LAMA1P25391 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
LAMA1P25391 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
LAMA1P25391 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 RNU1-114P-201ENST00000365297 166 ntBASIC15.21■□□□□ 0.03
LAMA1P25391 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 AL354877.1-201ENST00000424412 413 ntBASIC15.21■□□□□ 0.03
LAMA1P25391 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 RNA5SP486-201ENST00000515961 83 ntBASIC15.21■□□□□ 0.03
LAMA1P25391 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
LAMA1P25391 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
LAMA1P25391 AC018635.2-201ENST00000608625 364 ntBASIC15.21■□□□□ 0.03
LAMA1P25391 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.21■□□□□ 0.03
LAMA1P25391 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMA1P25391 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.21■□□□□ 0.03
LAMA1P25391 AC092127.1-201ENST00000567093 3455 ntBASIC15.21■□□□□ 0.02
LAMA1P25391 INE2-201ENST00000630399 1874 ntBASIC15.21■□□□□ 0.02
LAMA1P25391 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LAMA1P25391 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.21■□□□□ 0.02
LAMA1P25391 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LAMA1P25391 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms