Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP24386 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.92□□□□□ -0.02
CHMP24386 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP24386 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CHMP24386 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.92□□□□□ -0.02
CHMP24386 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.91□□□□□ -0.02
CHMP24386 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CHMP24386 AC006486.2-201ENST00000624246 2199 ntBASIC14.91□□□□□ -0.02
CHMP24386 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHMP24386 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.91□□□□□ -0.02
CHMP24386 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.91□□□□□ -0.02
CHMP24386 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.91□□□□□ -0.02
CHMP24386 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CHMP24386 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.91□□□□□ -0.02
CHMP24386 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.91□□□□□ -0.02
CHMP24386 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.91□□□□□ -0.02
CHMP24386 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.91□□□□□ -0.02
CHMP24386 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.91□□□□□ -0.02
CHMP24386 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.91□□□□□ -0.02
CHMP24386 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.91□□□□□ -0.02
CHMP24386 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.91□□□□□ -0.02
CHMP24386 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.91□□□□□ -0.02
CHMP24386 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CHMP24386 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CHMP24386 UXT-AS1-201ENST00000590504 1525 ntBASIC14.91□□□□□ -0.02
CHMP24386 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP24386 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHMP24386 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.9□□□□□ -0.02
CHMP24386 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CHMP24386 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CHMP24386 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP24386 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CHMP24386 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.9□□□□□ -0.02
CHMP24386 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CHMP24386 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.9□□□□□ -0.02
CHMP24386 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CHMP24386 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 NORAD-201ENST00000565493 5339 ntBASIC14.9□□□□□ -0.02
CHMP24386 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHMP24386 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHMP24386 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP24386 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP24386 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP24386 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHMP24386 PRYP6-201ENST00000514804 343 ntBASIC14.9□□□□□ -0.02
CHMP24386 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP24386 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.9□□□□□ -0.02
CHMP24386 AC004449.1-201ENST00000564240 433 ntBASIC14.9□□□□□ -0.02
CHMP24386 AP000842.3-202ENST00000569238 1080 ntBASIC14.9□□□□□ -0.02
CHMP24386 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.9□□□□□ -0.02
CHMP24386 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.9□□□□□ -0.02
CHMP24386 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CHMP24386 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
CHMP24386 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CHMP24386 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP24386 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
CHMP24386 U82695.1-201ENST00000635752 1889 ntBASIC14.9□□□□□ -0.02
CHMP24386 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP24386 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP24386 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHMP24386 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP24386 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms