Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PTPN1P18031 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.79■□□□□ 0.28
PTPN1P18031 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 SLC7A15P-201ENST00000424028 1363 ntBASIC16.78■□□□□ 0.28
PTPN1P18031 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN1P18031 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN1P18031 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
PTPN1P18031 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN1P18031 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.78■□□□□ 0.28
PTPN1P18031 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN1P18031 AC015922.1-201ENST00000421102 1152 ntBASIC16.78■□□□□ 0.28
PTPN1P18031 MEP1AP4-201ENST00000423244 1087 ntBASIC16.78■□□□□ 0.28
PTPN1P18031 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.78■□□□□ 0.28
PTPN1P18031 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.78■□□□□ 0.28
PTPN1P18031 SPDYE22P-201ENST00000582158 798 ntBASIC16.78■□□□□ 0.28
PTPN1P18031 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.78■□□□□ 0.28
PTPN1P18031 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.78■□□□□ 0.28
PTPN1P18031 AL662799.1-202ENST00000614205 422 ntBASIC16.78■□□□□ 0.28
PTPN1P18031 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PTPN1P18031 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN1P18031 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN1P18031 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PTPN1P18031 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN1P18031 LINC00554-201ENST00000564841 3011 ntBASIC16.78■□□□□ 0.28
PTPN1P18031 AP003680.1-201ENST00000598970 3660 ntBASIC16.77■□□□□ 0.28
PTPN1P18031 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN1P18031 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN1P18031 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.77■□□□□ 0.28
PTPN1P18031 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.77■□□□□ 0.28
PTPN1P18031 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PTPN1P18031 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN1P18031 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.77■□□□□ 0.28
PTPN1P18031 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN1P18031 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.77■□□□□ 0.28
PTPN1P18031 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN1P18031 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN1P18031 TOMM22P5-201ENST00000416399 439 ntBASIC16.77■□□□□ 0.28
PTPN1P18031 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.77■□□□□ 0.28
PTPN1P18031 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.77■□□□□ 0.28
PTPN1P18031 SLED1-202ENST00000512051 380 ntBASIC16.77■□□□□ 0.28
PTPN1P18031 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.77■□□□□ 0.28
PTPN1P18031 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.77■□□□□ 0.28
PTPN1P18031 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
PTPN1P18031 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN1P18031 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.77■□□□□ 0.28
PTPN1P18031 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.77■□□□□ 0.28
PTPN1P18031 CHCHD2P3-201ENST00000603038 451 ntBASIC16.77■□□□□ 0.28
PTPN1P18031 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN1P18031 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN1P18031 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN1P18031 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN1P18031 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN1P18031 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
PTPN1P18031 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN1P18031 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
PTPN1P18031 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.77■□□□□ 0.27
PTPN1P18031 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN1P18031 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PTPN1P18031 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN1P18031 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN1P18031 AL391825.1-201ENST00000457671 1364 ntBASIC16.77■□□□□ 0.27
PTPN1P18031 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.76■□□□□ 0.27
PTPN1P18031 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PTPN1P18031 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.76■□□□□ 0.27
PTPN1P18031 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PTPN1P18031 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
PTPN1P18031 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN1P18031 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PTPN1P18031 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN1P18031 AC087499.6-201ENST00000411576 835 ntBASIC16.76■□□□□ 0.27
PTPN1P18031 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN1P18031 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN1P18031 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 AC055876.2-201ENST00000531834 546 ntBASIC16.76■□□□□ 0.27
PTPN1P18031 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms