Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2AFXP16104 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2AFXP16104 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2AFXP16104 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.5■□□□□ 0.23
H2AFXP16104 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2AFXP16104 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.5■□□□□ 0.23
H2AFXP16104 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
H2AFXP16104 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
H2AFXP16104 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
H2AFXP16104 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
H2AFXP16104 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
H2AFXP16104 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.49■□□□□ 0.23
H2AFXP16104 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
H2AFXP16104 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.49■□□□□ 0.23
H2AFXP16104 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.49■□□□□ 0.23
H2AFXP16104 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
H2AFXP16104 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.49■□□□□ 0.23
H2AFXP16104 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.49■□□□□ 0.23
H2AFXP16104 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
H2AFXP16104 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.49■□□□□ 0.23
H2AFXP16104 YBX1P2-201ENST00000489612 999 ntBASIC16.49■□□□□ 0.23
H2AFXP16104 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.49■□□□□ 0.23
H2AFXP16104 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.49■□□□□ 0.23
H2AFXP16104 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.49■□□□□ 0.23
H2AFXP16104 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
H2AFXP16104 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC16.49■□□□□ 0.23
H2AFXP16104 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC16.49■□□□□ 0.23
H2AFXP16104 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2AFXP16104 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
H2AFXP16104 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
H2AFXP16104 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
H2AFXP16104 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2AFXP16104 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2AFXP16104 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2AFXP16104 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
H2AFXP16104 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
H2AFXP16104 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2AFXP16104 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.48■□□□□ 0.23
H2AFXP16104 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2AFXP16104 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC16.48■□□□□ 0.23
H2AFXP16104 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.48■□□□□ 0.23
H2AFXP16104 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.48■□□□□ 0.23
H2AFXP16104 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.48■□□□□ 0.23
H2AFXP16104 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.48■□□□□ 0.23
H2AFXP16104 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.48■□□□□ 0.23
H2AFXP16104 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.48■□□□□ 0.23
H2AFXP16104 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.48■□□□□ 0.23
H2AFXP16104 BNIP3P18-201ENST00000593976 575 ntBASIC16.48■□□□□ 0.23
H2AFXP16104 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.48■□□□□ 0.23
H2AFXP16104 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.48■□□□□ 0.23
H2AFXP16104 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.48■□□□□ 0.23
H2AFXP16104 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.48■□□□□ 0.23
H2AFXP16104 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.48■□□□□ 0.23
H2AFXP16104 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2AFXP16104 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2AFXP16104 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2AFXP16104 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2AFXP16104 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
H2AFXP16104 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2AFXP16104 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2AFXP16104 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
H2AFXP16104 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.48■□□□□ 0.23
H2AFXP16104 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2AFXP16104 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2AFXP16104 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2AFXP16104 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.48■□□□□ 0.23
H2AFXP16104 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.48■□□□□ 0.23
H2AFXP16104 NUTM2HP-201ENST00000442076 2498 ntBASIC16.47■□□□□ 0.23
H2AFXP16104 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
H2AFXP16104 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.47■□□□□ 0.23
H2AFXP16104 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.47■□□□□ 0.23
H2AFXP16104 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 VENTXP7-201ENST00000475503 772 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms