Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SCG2P13521 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.22■□□□□ 0.51
SCG2P13521 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.22■□□□□ 0.51
SCG2P13521 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.22■□□□□ 0.51
SCG2P13521 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.22■□□□□ 0.51
SCG2P13521 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SCG2P13521 AC236430.1-201ENST00000402231 743 ntBASIC18.22■□□□□ 0.51
SCG2P13521 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.22■□□□□ 0.51
SCG2P13521 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.22■□□□□ 0.51
SCG2P13521 KRT18P64-201ENST00000434946 1219 ntBASIC18.22■□□□□ 0.51
SCG2P13521 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.22■□□□□ 0.51
SCG2P13521 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.22■□□□□ 0.51
SCG2P13521 SLED1-202ENST00000512051 380 ntBASIC18.22■□□□□ 0.51
SCG2P13521 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.22■□□□□ 0.51
SCG2P13521 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.22■□□□□ 0.51
SCG2P13521 AF228730.6-201ENST00000641497 218 ntBASIC18.22■□□□□ 0.51
SCG2P13521 AC084121.3-201ENST00000641716 218 ntBASIC18.22■□□□□ 0.51
SCG2P13521 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 AC105917.1-201ENST00000506637 2539 ntBASIC18.22■□□□□ 0.51
SCG2P13521 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.22■□□□□ 0.51
SCG2P13521 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SCG2P13521 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SCG2P13521 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.22■□□□□ 0.51
SCG2P13521 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.22■□□□□ 0.51
SCG2P13521 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.22■□□□□ 0.51
SCG2P13521 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG2P13521 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.21■□□□□ 0.51
SCG2P13521 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.21■□□□□ 0.51
SCG2P13521 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.21■□□□□ 0.51
SCG2P13521 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SCG2P13521 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.21■□□□□ 0.51
SCG2P13521 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.21■□□□□ 0.51
SCG2P13521 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.21■□□□□ 0.51
SCG2P13521 TSPY16P-201ENST00000449843 468 ntBASIC18.21■□□□□ 0.51
SCG2P13521 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 AC135586.1-201ENST00000539323 574 ntBASIC18.21■□□□□ 0.51
SCG2P13521 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SCG2P13521 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.21■□□□□ 0.51
SCG2P13521 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.21■□□□□ 0.51
SCG2P13521 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.21■□□□□ 0.51
SCG2P13521 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SCG2P13521 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SCG2P13521 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG2P13521 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
SCG2P13521 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.21■□□□□ 0.5
SCG2P13521 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SCG2P13521 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SCG2P13521 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
SCG2P13521 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SCG2P13521 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCG2P13521 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG2P13521 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG2P13521 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.2■□□□□ 0.5
SCG2P13521 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG2P13521 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCG2P13521 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.2■□□□□ 0.5
SCG2P13521 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG2P13521 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCG2P13521 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCG2P13521 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG2P13521 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms