Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSF1RP07333 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.3■□□□□ 0.68
CSF1RP07333 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CSF1RP07333 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.3■□□□□ 0.68
CSF1RP07333 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CSF1RP07333 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.3■□□□□ 0.68
CSF1RP07333 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSF1RP07333 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSF1RP07333 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.3■□□□□ 0.68
CSF1RP07333 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CSF1RP07333 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSF1RP07333 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.3■□□□□ 0.68
CSF1RP07333 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSF1RP07333 HLA-V-201ENST00000429037 534 ntBASIC19.3■□□□□ 0.68
CSF1RP07333 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CSF1RP07333 AL355864.2-201ENST00000447420 863 ntBASIC19.3■□□□□ 0.68
CSF1RP07333 KLF2P4-201ENST00000451959 1225 ntBASIC19.3■□□□□ 0.68
CSF1RP07333 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.3■□□□□ 0.68
CSF1RP07333 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSF1RP07333 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.3■□□□□ 0.68
CSF1RP07333 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.3■□□□□ 0.68
CSF1RP07333 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSF1RP07333 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSF1RP07333 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSF1RP07333 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSF1RP07333 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.3■□□□□ 0.68
CSF1RP07333 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CSF1RP07333 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.3■□□□□ 0.68
CSF1RP07333 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSF1RP07333 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CSF1RP07333 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.29■□□□□ 0.68
CSF1RP07333 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.29■□□□□ 0.68
CSF1RP07333 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.29■□□□□ 0.68
CSF1RP07333 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CSF1RP07333 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.29■□□□□ 0.68
CSF1RP07333 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 BNIP3P42-201ENST00000454982 569 ntBASIC19.29■□□□□ 0.68
CSF1RP07333 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.29■□□□□ 0.68
CSF1RP07333 AP001582.1-201ENST00000525856 295 ntBASIC19.29■□□□□ 0.68
CSF1RP07333 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.29■□□□□ 0.68
CSF1RP07333 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.29■□□□□ 0.68
CSF1RP07333 BNIP3P29-201ENST00000598302 571 ntBASIC19.29■□□□□ 0.68
CSF1RP07333 AP005019.2-201ENST00000615104 511 ntBASIC19.29■□□□□ 0.68
CSF1RP07333 AC011447.5-201ENST00000616168 564 ntBASIC19.29■□□□□ 0.68
CSF1RP07333 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 AC022188.1-201ENST00000620960 1664 ntBASIC19.29■□□□□ 0.68
CSF1RP07333 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.29■□□□□ 0.68
CSF1RP07333 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CSF1RP07333 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1RP07333 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CSF1RP07333 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSF1RP07333 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.28■□□□□ 0.68
CSF1RP07333 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSF1RP07333 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSF1RP07333 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.28■□□□□ 0.68
CSF1RP07333 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.28■□□□□ 0.68
CSF1RP07333 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSF1RP07333 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.28■□□□□ 0.68
CSF1RP07333 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSF1RP07333 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CSF1RP07333 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.28■□□□□ 0.68
CSF1RP07333 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CSF1RP07333 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSF1RP07333 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.28■□□□□ 0.68
CSF1RP07333 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.28■□□□□ 0.68
CSF1RP07333 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CSF1RP07333 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.28■□□□□ 0.68
CSF1RP07333 AC099336.1-201ENST00000417053 1171 ntBASIC19.28■□□□□ 0.68
CSF1RP07333 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSF1RP07333 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.28■□□□□ 0.68
CSF1RP07333 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.28■□□□□ 0.68
CSF1RP07333 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.28■□□□□ 0.68
CSF1RP07333 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSF1RP07333 AC244669.2-201ENST00000612320 853 ntBASIC19.28■□□□□ 0.68
CSF1RP07333 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.28■□□□□ 0.68
CSF1RP07333 AL033527.4-201ENST00000641026 673 ntBASIC19.28■□□□□ 0.68
CSF1RP07333 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSF1RP07333 AL513523.2-202ENST00000427283 2040 ntBASIC19.28■□□□□ 0.68
CSF1RP07333 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CSF1RP07333 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.28■□□□□ 0.68
CSF1RP07333 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSF1RP07333 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.28■□□□□ 0.68
CSF1RP07333 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms